RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 DNASE1L3Q13609 305 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 POU6F1Q14863 301 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 CAPRIN2Q6IMN6 1127 aaKnown RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 PWWP2BQ6NUJ5 590 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TMEM126BQ8IUX1 230 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 CARFQ8N187 725 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TAB3Q8N5C8 712 aaPredicted RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 LILRA3Q8N6C8 439 aaPredicted RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 ACVR1CQ8NER5 493 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 OR4E2Q8NGC2 313 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 LCN9Q8WX39 176 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 FERD3LQ96RJ6 166 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 DESI2Q9BSY9 194 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TMEM121Q9BTD3 319 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TWSG1Q9GZX9 223 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 SRMSQ9H3Y6 488 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 FANCEQ9HB96 536 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 LHX9Q9NQ69 397 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 ZNF71Q9NQZ8 489 aaPredicted RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 NLE1Q9NVX2 485 aaPredicted RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 POLHQ9Y253 713 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 PIPSLA2A3N6 862 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 GSAPA4D1B5 854 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 CDC14CA4D256 554 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 MATN2O00339 956 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 MAP3K7O43318 606 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 METTL18O95568 372 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 GAS8O95995 478 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 NTRK1P04629 796 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 POLR2CP19387 275 aaPredicted RBP17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 CDH3P22223 829 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 TUBB4BP68371 445 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 TUBB2AQ13885 445 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 KCTD11Q693B1 232 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 CERS6Q6ZMG9 384 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 SERPINA9Q86WD7 417 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 D2HGDHQ8N465 521 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 OR8K5Q8NH50 307 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 CT55Q8WUE5 264 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 STYXQ8WUJ0 223 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 COG4Q9H9E3 785 aa17.97■□□□□ 0.47
AC004540.1-201ENST00000439120 GOLGA6L6A8MZA4 724 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 C21orf140B9A014 251 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 H7C0S8 307 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 CPNE3O75131 537 aaKnown RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 CREG1O75629 220 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 SCRG1O75711 98 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 AP2A1O95782 977 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 CDKN1CP49918 316 aaPredicted RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 KPNA2P52292 529 aaKnown RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 TLE1Q04724 770 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 CACNG1Q06432 222 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 KLF1Q13351 362 aaPredicted RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 GPR19Q15760 415 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 LACTB2Q53H82 288 aaPredicted RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 LINC00523Q86TU6 105 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 KLHDC8BQ8IXV7 354 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 DNAAF3Q8N9W5 541 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 ABHD17AQ96GS6 310 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 KCND1Q9NSA2 647 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 PIH1D1Q9NWS0 290 aaKnown RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 IMPACTQ9P2X3 320 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 R3HDM2Q9Y2K5 976 aaKnown RBP17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 PCDHGA6Q9Y5G7 932 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 KCNMB2Q9Y691 235 aa17.96■□□□□ 0.47
AC004540.1-201ENST00000439120 IGLV3-16A0A075B6K0 115 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 TRBV5-4A0A0C4DH59 114 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 MKRN2OSH3BPM6 223 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 DDX3YO15523 660 aaKnown RBP17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 GSTM1P09488 218 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 LMAN1P49257 510 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 GDF10P55107 478 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 RPS15P62841 145 aaKnown RBP17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 GSTM4Q03013 218 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 SKIDA1Q1XH10 827 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 SEL1L2Q5TEA6 688 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 SPC24Q8NBT2 197 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 SLC35B2Q8TB61 432 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 SEC14L1Q92503 715 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 CDKN2AIPNLQ96HQ2 116 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 ACTL8Q9H568 366 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 MVB12BQ9H7P6 319 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 SMARCAL1Q9NZC9 954 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 ANAPC2Q9UJX6 822 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 POMT2Q9UKY4 750 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 MAN2B2Q9Y2E5 1009 aa17.95■□□□□ 0.46
AC004540.1-201ENST00000439120 BSNQ9UPA5 3926 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 CCDC78A2IDD5 438 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 E7EVH7 732 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 QSOX1O00391 747 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 AP2A2O94973 939 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 MSNP26038 577 aaKnown RBP17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 CD151P48509 253 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 RPA4Q13156 261 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 FBXO38Q6PIJ6 1188 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 HOOK3Q86VS8 718 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 TMEM139Q8IV31 216 aa17.94■□□□□ 0.46
AC004540.1-201ENST00000439120 CLDN19Q8N6F1 224 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms