RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TAS2R16Q9NYV7 291 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 CCDC162PA2VCL2 907 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 GOLGA8CPA6NN73 597 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 MEN1O00255 615 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 DYRK3O43781 588 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 PAGE1O75459 146 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TGFB3P10600 412 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 GADD45AP24522 165 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ARPC4P59998 168 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 HMGCS1Q01581 520 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 PRKG2Q13237 762 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 FAM174BQ3ZCQ3 159 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF691Q5VV52 312 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 Q6ZSR9 355 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ELMOD1Q8N336 334 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TRIB2Q92519 343 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 FCRL2Q96LA5 508 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ATOH8Q96SQ7 321 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ACTL8Q9H568 366 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TESMINQ9Y4I5 508 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 UPK3BL1B0FP48 263 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 UPK3BL2E5RIL1 263 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 TLR5O60602 858 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 SLC2A3P11169 496 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 GGT1P19440 569 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 IGFBP5P24593 272 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 GMPSP49915 693 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 TRAF3Q13114 568 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 GBX1Q14549 363 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 TAB1Q15750 504 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 CARD16Q5EG05 197 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF648Q5T619 568 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 ANKS6Q68DC2 871 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PROSER1Q86XN7 944 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 BTN2A3PQ96KV6 586 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 FBXO8Q9NRD0 319 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PAQR5Q9NXK6 330 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 ABCG2Q9UNQ0 655 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PKP3Q9Y446 797 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 VIPP01282 170 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 CAPN1P07384 714 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 EFNA1P20827 205 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 RPL38P63173 70 aaKnown RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 ZBTB6Q15916 424 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 CLPPQ16740 277 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 SIRPB2Q5JXA9 342 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 IRAK1BP1Q5VVH5 260 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 LETMD1Q6P1Q0 360 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 LEMD2Q8NC56 503 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 YIPF6Q96EC8 236 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 TXNDC15Q96J42 360 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 CEP295NLQ96MC4 621 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 GPR21Q99679 349 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 CHCHD6Q9BRQ6 235 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 TMEM246Q9BRR3 403 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 FARSBQ9NSD9 589 aaKnown RBP13.17□□□□□ -0.3
ACTN1-204ENST00000438964 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
ACTN1-204ENST00000438964 H0Y626 953 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 PIRO00625 290 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 OR1I1O60431 355 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 TRIM16O95361 564 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 GUCA1CO95843 209 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 DPEP1P16444 411 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 ADCYAP1R1P41586 468 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CLCNKBP51801 687 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 TPRG1LQ5T0D9 272 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 SDHAF4Q5VUM1 108 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 EID3Q8N140 333 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 PIK3C3Q8NEB9 887 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 TP53INP1Q96A56 240 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 EXOC2Q96KP1 924 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 RBM4BQ9BQ04 359 aaKnown RBP13.16□□□□□ -0.3
ACTN1-204ENST00000438964 RBM4Q9BWF3 364 aaKnown RBP13.16□□□□□ -0.3
ACTN1-204ENST00000438964 OR51E2Q9H255 320 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 SMPD4Q9NXE4 827 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CD274Q9NZQ7 290 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 GMPPBQ9Y5P6 360 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 MATN3O15232 486 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CD3EAPO15446 510 aaKnown RBP13.16□□□□□ -0.3
ACTN1-204ENST00000438964 AIREO43918 545 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CYP11A1P05108 521 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 SLC2A4P14672 509 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms