RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 GPATCH4Q5T3I0 446 aaKnown RBP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 SERTAD4-AS1Q5TG53 156 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 LCTLQ6UWM7 567 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 SPNS3Q6ZMD2 512 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF497Q6ZNH5 498 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 KCTD8Q6ZWB6 473 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 MOGAT3Q86VF5 341 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF34Q8IZ26 560 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF248Q8NDW4 579 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 KLHDC9Q8NEP7 349 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 CADM4Q8NFZ8 388 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF524Q96C55 264 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 FBXL8Q96CD0 374 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 C17orf77Q96MU5 243 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 DEFB129Q9H1M3 183 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 ESRP2Q9H6T0 727 aaKnown RBP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 MKKSQ9NPJ1 570 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 FAM118AQ9NWS6 357 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 CTNNAL1Q9UBT7 734 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 SMAD5-AS1Q9Y6J3 95 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 STON1Q9Y6Q2 735 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 DENND4AQ7Z401 1863 aa2.75□□□□□ -1.97
HMGB1P18-201ENST00000438801 BSNQ9UPA5 3926 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 RTL1A6NKG5 1358 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 RNF212BA8MTL3 300 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 WDR46O15213 610 aaKnown RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 BCAT2O15382 392 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 CYC1P08574 325 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 CNPP09543 421 aaKnown RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 MYOD1P15172 320 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 CSRP1P21291 193 aaKnown RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 RRM1P23921 792 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 DDIT3P35638 169 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 RAD23BP54727 409 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 HNRNPH2P55795 449 aaKnown RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 GRIK3Q13003 919 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 VEPH1Q14D04 833 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD1Q15327 319 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 TAF11Q15544 211 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 EIF2S3LQ2VIR3 472 aaKnown RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 TUBB8Q3ZCM7 444 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 CCNYL2Q5T2Q4 361 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 SLC35E4Q6ICL7 350 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 KCTD18Q6PI47 426 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 CEACAM20Q6UY09 585 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 GPAT4Q86UL3 456 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 HERC6Q8IVU3 1022 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 FTSJ3Q8IY81 847 aaKnown RBP2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 DEFB124Q8NES8 71 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 VPS37AQ8NEZ2 397 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 BEST2Q8NFU1 509 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 SPPL3Q8TCT6 385 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 STAMQ92783 540 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 SNTG1Q9NSN8 517 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 IL1RAPL1Q9NZN1 696 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 PEMTQ9UBM1 199 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 DAAM1Q9Y4D1 1078 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 CEMIPQ8WUJ3 1361 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 PLXNB3Q9ULL4 1909 aa2.74□□□□□ -1.97
HMGB1P18-201ENST00000438801 PLXNB2O15031 1838 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 SCN9AQ15858 1988 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 SPAARA0A1B0GVQ0 90 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 KLK10O43240 276 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 PCDH7O60245 1069 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ECE2O60344 883 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 WDR1O75083 606 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 INHBAP08476 426 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 PATE4P0C8F1 98 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 DDX5P17844 614 aaKnown RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 CORO1AP31146 461 aaKnown RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 CHKAP35790 457 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 HOXA1P49639 335 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 TERF1P54274 439 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 DRG2P55039 364 aaKnown RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 EEF1A1P68104 462 aaKnown RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 PDE1BQ01064 536 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 SLC1A5Q15758 541 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 SGO1Q5FBB7 561 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF667Q5HYK9 610 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZC2HC1BQ5TFG8 222 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD45Q5TZF3 282 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 EEF1A1P5Q5VTE0 462 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZNF790Q6PG37 636 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 LINGO2Q7L985 606 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD33Q7Z3H0 272 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 TADA2BQ86TJ2 420 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANKRD13CQ8N6S4 541 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 ADAD2Q8NCV1 583 aaKnown RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 MAPK1IP1LQ8NDC0 245 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 OR2AK2Q8NG84 335 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 EYA3Q99504 573 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 POLR3CQ9BUI4 534 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 KCNN2Q9H2S1 579 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 MAGEE1Q9HCI5 957 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 KIAA1456Q9P272 454 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 GJD2Q9UKL4 321 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms