RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 HACD3Q9P035 362 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 IL17CQ9P0M4 197 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 EGFL7Q9UHF1 273 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 SLC25A13Q9UJS0 675 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 NDUFAF1Q9Y375 327 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 COMMD10Q9Y6G5 202 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 SLC30A1Q9Y6M5 507 aa13.66□□□□□ -0.22
PTCHD3-201ENST00000438700 GIPC1O14908 333 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 HTRA2O43464 458 aaPredicted RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 OR4F21O95013 312 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 ESRRBO95718 433 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 TCF3P15923 654 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 ZNF23P17027 643 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PSMA3P25788 255 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 VARSP26640 1264 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 CA5AP35218 305 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PSMD7P51665 324 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 C16orf72Q14CZ0 275 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 BORAQ6PGQ7 559 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 TMEM126BQ8IUX1 230 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 CATSPER1Q8NEC5 780 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 OR2T11Q8NH01 316 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 FNDC8Q8TC99 324 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PPWD1Q96BP3 646 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 RSPRY1Q96DX4 576 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 BOCQ9BWV1 1114 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 SLCO3A1Q9UIG8 710 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 FAF1Q9UNN5 650 aaPredicted RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 EPOPA6NHQ4 379 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 GOLGA8CPA6NN73 597 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 BBIP1A8MTZ0 92 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 FXYD1O00168 92 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 E2F3O00716 465 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 STX16O14662 325 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PRAMEF1O95521 474 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 CAPNS1P04632 268 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 IDO1P14902 403 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 ATP6V1B2P21281 511 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 VIPR2P41587 438 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 CASP2P42575 452 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PTGER3P43115 390 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 SNRPD1P62314 119 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 SEMG2Q02383 582 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 CREB5Q02930 508 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 HABP4Q5JVS0 413 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 HACD2Q6Y1H2 254 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 FRA10AC1Q70Z53 315 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 ZNF554Q86TJ5 538 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 NOL11Q9H8H0 719 aaKnown RBP13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 MAGEE1Q9HCI5 957 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
PTCHD3-201ENST00000438700 C5orf42Q9H799 3197 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TCRBV3S1A0A5B6 114 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC9A3R1O14745 358 aaPredicted RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 KLK8O60259 260 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 SOCS5O75159 536 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 H6PDO95479 791 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 MLYCDO95822 493 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 ESR1P03372 595 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 GNAO1P09471 354 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 SERPINA4P29622 427 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 WEE1P30291 646 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 HMGCLP35914 325 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CDK9P50750 372 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CLCN7P51798 805 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TRAP1Q12931 704 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 GPRIN3Q6ZVF9 776 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 ADIPOR2Q86V24 386 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 ZSWIM9Q86XI8 627 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 ERI1Q8IV48 349 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CLDN19Q8N6F1 224 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CANT1Q8WVQ1 401 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 APOL5Q9BWW9 433 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CIPCQ9C0C6 399 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 SFXN1Q9H9B4 322 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 BLOC1S6Q9UL45 172 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 GPR45Q9Y5Y3 372 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 C1orf232A0A0U1RR37 186 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CXorf51AA0A1B0GTR3 108 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 H7C0S8 307 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TIPRLO75663 272 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CHEK2O96017 543 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TRBC1P01850 177 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 UROSP10746 265 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 ALDH3B2P48448 385 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CACNG1Q06432 222 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TCEAL5Q5H9L2 206 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TMEM215Q68D42 235 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 HMBOX1Q6NT76 420 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 LETMD1Q6P1Q0 360 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 IFNEQ86WN2 208 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC15A3Q8IY34 581 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 OR56A4Q8NGH8 313 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms