RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 KMT5CQ86Y97 462 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 TMEM126BQ8IUX1 230 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 APLFQ8IW19 511 aaPredicted RBP17.68■□□□□ 0.42
GTF3A-204ENST00000438571 CFAP206Q8IYR0 622 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 TEX19Q8NA77 164 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 OR4E2Q8NGC2 313 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 LINC00615Q96LM1 132 aaPredicted RBP17.68■□□□□ 0.42
GTF3A-204ENST00000438571 TUBB2BQ9BVA1 445 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 CHST8Q9H2A9 424 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 SOHLH2Q9NX45 425 aa17.68■□□□□ 0.42
GTF3A-204ENST00000438571 ARGFXA6NJG6 315 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 C2orf81A6NN90 581 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 KCNN4O15554 427 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 ZBTB11O95625 1053 aaPredicted RBP17.67■□□□□ 0.42
GTF3A-204ENST00000438571 RBP3P10745 1247 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 CTNNA1P35221 906 aaKnown RBP17.67■□□□□ 0.42
GTF3A-204ENST00000438571 EIF3EP60228 445 aaKnown RBP17.67■□□□□ 0.42
GTF3A-204ENST00000438571 GSE1Q14687 1217 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 CCDC181Q5TID7 509 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 ITPRIPL1Q6GPH6 555 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 NXPE1Q8N323 547 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 HM13Q8TCT9 377 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 MR1Q95460 341 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 DNAJC1Q96KC8 554 aaKnown RBP17.67■□□□□ 0.42
GTF3A-204ENST00000438571 FCRL4Q96PJ5 515 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 OSBPL8Q9BZF1 889 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 KLHL25Q9H0H3 589 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 KCND1Q9NSA2 647 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 POMT2Q9UKY4 750 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 ACSL5Q9ULC5 683 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 BTRCQ9Y297 605 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 DUSP10Q9Y6W6 482 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
GTF3A-204ENST00000438571 MDC1Q14676 2089 aaKnown RBP17.67■□□□□ 0.42
GTF3A-204ENST00000438571 C5orf60A6NFR6 353 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 SLC9B1P1A6NJY1 282 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 BTN3A3O00478 584 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 BTN3A1O00481 513 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 PVRP15151 417 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 ST6GAL1P15907 406 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 CDH3P22223 829 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 PTGIRP43119 386 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 CD97P48960 835 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 LMAN1P49257 510 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 ZNF658BQ4V348 819 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-204ENST00000438571 ZNF789Q5FWF6 425 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 ZNF517Q6ZMY9 492 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-204ENST00000438571 CDKL3Q8IVW4 592 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-204ENST00000438571 TBL1YQ9BQ87 522 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 COG4Q9H9E3 785 aa17.66■□□□□ 0.42
GTF3A-204ENST00000438571 FARSAQ9Y285 508 aaKnown RBP17.66■□□□□ 0.42
GTF3A-204ENST00000438571 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
GTF3A-204ENST00000438571 SOWAHDA6NJG2 315 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 LDB2O43679 373 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 RECKO95980 971 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 PTMSP20962 102 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 PDHA2P29803 388 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 MC4RP32245 332 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 NADK2Q4G0N4 442 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 PLEKHS1Q5SXH7 462 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 ARMC6Q6NXE6 501 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
GTF3A-204ENST00000438571 SYVN1Q86TM6 617 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 ENDOVQ8N8Q3 282 aaKnown RBP17.65■□□□□ 0.42
GTF3A-204ENST00000438571 OR1L3Q8NH93 324 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 ADAMTS17Q8TE56 1095 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 ALG3Q92685 438 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 DCUN1D1Q96GG9 259 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 SPATA13Q96N96 652 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 OR52A5Q9H2C5 316 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 REXO2Q9Y3B8 237 aaKnown RBP17.65■□□□□ 0.42
GTF3A-204ENST00000438571 PCDHA3Q9Y5H8 950 aa17.65■□□□□ 0.42
GTF3A-204ENST00000438571 SPTAN1Q13813 2472 aaKnown RBP17.64■□□□□ 0.42
GTF3A-204ENST00000438571 SPTBN1Q01082 2364 aaKnown RBP17.64■□□□□ 0.41
GTF3A-204ENST00000438571 CCDC66A2RUB6 948 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 GSAPA4D1B5 854 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 CRTAMO95727 393 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 CAPN1P07384 714 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 ATP1B2P14415 290 aaPredicted RBP17.64■□□□□ 0.41
GTF3A-204ENST00000438571 ITGALP20701 1170 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 RORAP35398 523 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 PREPP48147 710 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 COPS2P61201 443 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 RPS15P62841 145 aaKnown RBP17.64■□□□□ 0.41
GTF3A-204ENST00000438571 KRT33BQ14525 404 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 PTCHD3Q3KNS1 767 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 FAM198BQ6UWH4 519 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 SNX20Q7Z614 316 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 BPHLQ86WA6 291 aaPredicted RBP17.64■□□□□ 0.41
GTF3A-204ENST00000438571 DSELQ8IZU8 1212 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 PHC3Q8NDX5 983 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 ACVR1CQ8NER5 493 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 OR52E1Q8NGJ3 308 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 ZFPM2Q8WW38 1151 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 FERD3LQ96RJ6 166 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 COPS8Q99627 209 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 HGH1Q9BTY7 390 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 GPR87Q9BY21 358 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 XKR8Q9H6D3 395 aa17.64■□□□□ 0.41
GTF3A-204ENST00000438571 LATS2Q9NRM7 1088 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms