RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 DEF6Q9H4E7 631 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 ZNF552Q9H707 407 aaPredicted RBP14.39□□□□□ -0.11
HDAC8-213ENST00000436675 CHMP5Q9NZZ3 219 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 SERTAD3Q9UJW9 196 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 POMT2Q9UKY4 750 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 PADI2Q9Y2J8 665 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 PTRH2Q9Y3E5 179 aaKnown RBP14.39□□□□□ -0.11
HDAC8-213ENST00000436675 PCDHGA10Q9Y5H3 936 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 CSAG2Q9Y5P2 127 aa14.39□□□□□ -0.11
HDAC8-213ENST00000436675 DCHS2Q6V1P9 2916 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 PEX12O00623 359 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 ZG16O60844 167 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 KRT38O76015 456 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 CBSLP0DN79 551 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 AGXTP21549 392 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 CBSP35520 551 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 SPAM1P38567 509 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 ADCY2Q08462 1091 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 SLC9A5Q14940 896 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 NFKBIBQ15653 356 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 HIF1AQ16665 826 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 DCAF10Q5QP82 559 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 MCEMP1Q8IX19 187 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 SLC25A41Q8N5S1 370 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 LILRA3Q8N6C8 439 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-213ENST00000436675 PLD5Q8N7P1 536 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 ST6GALNAC3Q8NDV1 305 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 FER1L6-AS2Q96M78 137 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 KIR3DX1Q9H7L2 352 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 GLOD4Q9HC38 313 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 AGPAT4Q9NRZ5 378 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 C1GALT1Q9NS00 363 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 HIVEP1P15822 2718 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 CCDC168Q8NDH2 2452 aa14.38□□□□□ -0.11
HDAC8-213ENST00000436675 GLYATL1P3A0A0U1RQE8 302 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 PRSS44E7EML9 344 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 E7EQ34 232 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 KLF7O75840 302 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-213ENST00000436675 SLC35G4P0C7Q5 338 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 MSH3P20585 1137 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 KDELR1P24390 212 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 HMGCLP35914 325 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 CHRNA4P43681 627 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 PER3P56645 1201 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 PTPRCAPQ14761 206 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 ZRSR2Q15696 482 aaKnown RBP14.37□□□□□ -0.11
HDAC8-213ENST00000436675 IGFL3Q6UXB1 125 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 Q6ZS92 163 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 RBM43Q6ZSC3 357 aaKnown RBP14.37□□□□□ -0.11
HDAC8-213ENST00000436675 DAAM2Q86T65 1068 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 KCNMB4Q86W47 210 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 CARFQ8N187 725 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 LCN9Q8WX39 176 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 TADA1Q96BN2 335 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 XPO4Q9C0E2 1151 aaKnown RBP14.37□□□□□ -0.11
HDAC8-213ENST00000436675 SRMSQ9H3Y6 488 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 LMBRD1Q9NUN5 540 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 P4HTMQ9NXG6 502 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 GPN3Q9UHW5 284 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-213ENST00000436675 ENTPD4Q9Y227 616 aa14.37□□□□□ -0.11
HDAC8-213ENST00000436675 DNMT3AQ9Y6K1 912 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-213ENST00000436675 AKAP9Q99996 3911 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 PKDREJQ9NTG1 2253 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 MGAT4DA6NG13 374 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 BTN3A3O00478 584 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 MAP3K7O43318 606 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 ALOX12BO75342 701 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 PROSCO94903 275 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 PRDX3P30048 256 aaKnown RBP14.36□□□□□ -0.11
HDAC8-213ENST00000436675 FOLR3P41439 243 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 SSPNQ14714 243 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 LONRF2Q1L5Z9 754 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 FILIP1LQ4L180 1135 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 SIRPB2Q5JXA9 342 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 ZNF385CQ66K41 422 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-213ENST00000436675 CDHR3Q6ZTQ4 885 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 CFAP206Q8IYR0 622 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 BLOC1S5Q8TDH9 187 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-213ENST00000436675 ZFPM2Q8WW38 1151 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 TM9SF4Q92544 642 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 FERD3LQ96RJ6 166 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 SRPK1Q96SB4 655 aaKnown RBP14.36□□□□□ -0.11
HDAC8-213ENST00000436675 BARD1Q99728 777 aaKnown RBP14.36□□□□□ -0.11
HDAC8-213ENST00000436675 IL17CQ9P0M4 197 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 TMEM63CQ9P1W3 806 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 CTTNBP2NLQ9P2B4 639 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 ACSL5Q9ULC5 683 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 CDYLQ9Y232 598 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 COLEC10Q9Y6Z7 277 aa14.36□□□□□ -0.11
HDAC8-213ENST00000436675 SNRNP200O75643 2136 aaKnown RBP14.36□□□□□ -0.11
HDAC8-213ENST00000436675 NUP210LQ5VU65 1888 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 A0A087X0T9 212 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 A0A0A6YYK5 440 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-213ENST00000436675 LRRD1A4D1F6 860 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 BTN3A1O00481 513 aa14.35□□□□□ -0.11
HDAC8-213ENST00000436675 GAPDHSO14556 408 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms