RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 MR1Q95460 341 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 HAUS1Q96CS2 278 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 CCDC42Q96M95 316 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 NLNQ9BYT8 704 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 OR52A5Q9H2C5 316 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 GOLPH3Q9H4A6 298 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 SYTL2Q9HCH5 934 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 ACSS2Q9NR19 701 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 C1GALT1Q9NS00 363 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 PCMTD2Q9NV79 361 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 ZNHIT6Q9NWK9 470 aaKnown RBP10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 RSPH14Q9UHP6 348 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 TRHDEQ9UKU6 1024 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 TCFL5Q9UL49 500 aa10.65□□□□□ -0.7
SPTLC1P4-201ENST00000435997 PCSK5Q92824 1860 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C5orf60A6NFR6 353 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 H3BMH7 237 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 APOC4-APOC2K7ER74 178 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 STX7O15400 261 aaKnown RBP10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 VPS4BO75351 444 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 AGTP01019 485 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 APOC2P02655 101 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TNNT1P13805 278 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TNNT3P45378 269 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ARL4DP49703 201 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OLIG2Q13516 323 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 NCF4Q15080 339 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ODF2Q5BJF6 829 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FHL5Q5TD97 284 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FAM69BQ5VUD6 431 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 KAZNQ674X7 775 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 BBS12Q6ZW61 710 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HPS6Q86YV9 775 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GLIS1Q8NBF1 620 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ACVR1CQ8NER5 493 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FDCSPQ8NFU4 85 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OR4K2Q8NGD2 314 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OR1L3Q8NH93 324 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SMAD5Q99717 465 aaKnown RBP10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CCM2Q9BSQ5 444 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FICDQ9BVA6 458 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ASB8Q9H765 288 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 COG4Q9H9E3 785 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FANCEQ9HB96 536 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SOHLH2Q9NX45 425 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FKBPLQ9UIM3 349 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 VPS4AQ9UN37 437 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SNX7Q9UNH6 387 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ZNF451Q9Y4E5 1061 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HEBP2Q9Y5Z4 205 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ALG6Q9Y672 507 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 COLEC10Q9Y6Z7 277 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ICE1Q9Y2F5 2266 aa10.64□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TRBV5-4A0A0C4DH59 114 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C17orf113A0A1B0GUU1 675 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SLC9B1P1A6NJY1 282 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 BTN3A3O00478 584 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SEMA7AO75326 666 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TMEM63AO94886 807 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ZRANB2O95218 330 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 LCA5LO95447 670 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 KLK3P07288 261 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ST6GAL1P15907 406 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 POLR2CP19387 275 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CCL11P51671 97 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 VAV2P52735 878 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GEMP55040 296 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ITGA1P56199 1179 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PRR30Q53SZ7 412 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TMTC4Q5T4D3 741 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SLC6A19Q695T7 634 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DENND5AQ6IQ26 1287 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C11orf63Q6NUN7 778 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ARMC6Q6NXE6 501 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 JMJD6Q6NYC1 403 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SYTL1Q8IYJ3 562 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RCOR2Q8IZ40 523 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 NXPE1Q8N323 547 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ZBTB2Q8N680 514 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TMEM102Q8N9M5 508 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OR4E2Q8NGC2 313 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OR13C4Q8NGS5 318 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SSC4DQ8WTU2 575 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 KRT35Q92764 455 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ULK4Q96C45 1275 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 NRTNQ99748 197 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 NUDT9Q9BW91 350 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TFB2MQ9H5Q4 396 aaKnown RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PLEKHB1Q9UF11 243 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SHANK1Q9Y566 2161 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C2orf81A6NN90 581 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TCP11X1B4DZS4 312 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TMEM150CB9EJG8 249 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 H7C0S8 307 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 BTN3A1O00481 513 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms