RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DTWD1Q8N5C7 304 aa10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 VN1R3Q9BXE9 311 aa10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 FARSBQ9NSD9 589 aaKnown RBP10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 ELOVL2Q9NXB9 296 aa10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 RABL2AQ9UBK7 228 aaPredicted RBP10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 LHX3Q9UBR4 397 aa10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 MOSPD1Q9UJG1 213 aa10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 PRSS21Q9Y6M0 314 aa10.25□□□□□ -0.77
CLSTN1-203ENST00000435891 TBKBP1A7MCY6 615 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 A8MX80 341 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 RASAL1O95294 804 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 GPIP06744 558 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PCNAP12004 261 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 NR4A1P22736 598 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ZXDBP98169 803 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PTGR1Q14914 329 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CYBRD1Q53TN4 286 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ADGRF1Q5T601 910 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ERI1Q8IV48 349 aaKnown RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CAPSLQ8WWF8 208 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 RNF145Q96MT1 663 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CHID1Q9BWS9 393 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CIPCQ9C0C6 399 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ANAPC2Q9UJX6 822 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CDC14AQ9UNH5 594 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 SLC8A2Q9UPR5 921 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 POLR3HQ9Y535 204 aaPredicted RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 C1orf232A0A0U1RR37 186 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 GAPDHSO14556 408 aaPredicted RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ANKRD28O15084 1053 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 NOL3O60936 208 aaKnown RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 TCEA1P23193 301 aaKnown RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 TM4SF4P48230 202 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 HSPA7P48741 367 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 EMX2Q04743 252 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CARTPTQ16568 116 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 OTUD3Q5T2D3 398 aaPredicted RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ANKS3Q6ZW76 656 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CARNMT1Q8N4J0 409 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 C9orf16Q9BUW7 83 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ADGRE3Q9BY15 652 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CARS2Q9HA77 564 aaKnown RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 NTN4Q9HB63 628 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PARVBQ9HBI1 364 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 LTB4R2Q9NPC1 389 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 STARD7Q9NQZ5 370 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 SACM1LQ9NTJ5 587 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 FAM234BA2RU67 622 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 FFAR3O14843 346 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 GPR42O15529 346 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 B4GAT1O43505 415 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 TCF3P15923 654 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CDK9P50750 372 aaKnown RBP10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CLCN4P51793 760 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PRKG2Q13237 762 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 NR1D2Q14995 579 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 NR6A1Q15406 480 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ADRM1Q16186 407 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PERM1Q5SV97 790 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 CYP20A1Q6UW02 462 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PACRGLQ8N7B6 248 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PDZD8Q8NEN9 1154 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 HM13Q8TCT9 377 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 TSPEARQ8WU66 669 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ZIM2Q9NZV7 527 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 ATP11BQ9Y2G3 1177 aa10.24□□□□□ -0.77
CLSTN1-203ENST00000435891 PIKFYVEQ9Y2I7 2098 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 H0Y858 1186 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 CLOCKO15516 846 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 TAPBPO15533 448 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 SMAD6O43541 496 aaKnown RBP10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 ESR1P03372 595 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 MYCLP1P12525 358 aaPredicted RBP10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 UGT1A1P22309 533 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 UGT1A4P22310 534 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 UGT1A3P35503 534 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 UGT1A5P35504 534 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 PTGER3P43115 390 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 MRPL19P49406 292 aaKnown RBP10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 GRIK2Q13002 908 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 TRAF3Q13114 568 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 PLD1Q13393 1074 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 PHKG1Q16816 387 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 AP5B1Q2VPB7 878 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 ZIK1Q3SY52 487 aaPredicted RBP10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 GLYATQ6IB77 296 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 GPR63Q9BZJ6 419 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 IKZF5Q9H5V7 419 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 IPPKQ9H8X2 491 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 TLR9Q9NR96 1032 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 VAPAQ9P0L0 249 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 UTS2RQ9UKP6 389 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 DHRS7Q9Y394 339 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 PRRC2BQ5JSZ5 2229 aaKnown RBP10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 NOTOA8MTQ0 251 aa10.23□□□□□ -0.77
CLSTN1-203ENST00000435891 H7C0S8 307 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms