RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 IL37Q9NZH6 218 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 CXXC1Q9P0U4 656 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-203ENST00000434376 CNOT6Q9ULM6 557 aaKnown RBP15.31■□□□□ 0.04
SCARF1-203ENST00000434376 COQ6Q9Y2Z9 468 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 SYCE1LA8MT33 242 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 KPNA3O00505 521 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-203ENST00000434376 GBAP04062 536 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 CR2P20023 1033 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 LIPEQ05469 1076 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 SELPLGQ14242 412 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 TEAD2Q15562 447 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 ANKRD26P1Q6NSI1 321 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 NCEH1Q6PIU2 408 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 PELI3Q8N2H9 469 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 FAR2Q96K12 515 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 TBC1D23Q9NUY8 699 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 PCTPQ9UKL6 214 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 SPTBN5Q9NRC6 3674 aaKnown RBP15.31■□□□□ 0.04
SCARF1-203ENST00000434376 LOC730098B7Z3J9 87 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 SLC22A3O75751 556 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 HLA-EP13747 358 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 PHEXP78562 749 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 BNIP3Q12983 259 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 GOLGA7Q7Z5G4 137 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 NKAPQ8N5F7 415 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 C12orf43Q96C57 262 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 LRRC58Q96CX6 371 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 RANBP9Q96S59 729 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 EXD2Q9NVH0 621 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 BCAS2O75934 225 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 OGNP20774 298 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 IL12AP29459 219 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 WASP42768 502 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 RECQLP46063 649 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 GTF2H2Q13888 395 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 PLEKHG6Q3KR16 790 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 SAMD4BQ5PRF9 694 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 C6orf136Q5SQH8 315 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 GTF2H2CQ6P1K8 395 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 GCNT7Q6ZNI0 430 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 UTS2BQ765I0 119 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 ERI1Q8IV48 349 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 CLEC4FQ8N1N0 589 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 KREMEN2Q8NCW0 462 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 TSEN34Q9BSV6 310 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 TFB2MQ9H5Q4 396 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 ACOT8O14734 319 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 RSL1D1O76021 490 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 GLUD1P00367 558 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 OCM2P0CE71 109 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 OCMP0CE72 109 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 HALP42357 657 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 FAM174BQ3ZCQ3 159 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 SFRP1Q8N474 314 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 TTC30BQ8N4P2 665 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 ADAMTS19Q8TE59 1207 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 PLD4Q96BZ4 506 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 MTERF1Q99551 399 aaKnown RBP15.3■□□□□ 0.04
SCARF1-203ENST00000434376 EFHD1Q9BUP0 239 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 ACAT2Q9BWD1 397 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 OPTCQ9UBM4 332 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 GMEB1Q9Y692 573 aa15.3■□□□□ 0.04
SCARF1-203ENST00000434376 LEFTY2O00292 366 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 SOCS2O14508 198 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 AP1G1O43747 822 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 NOL3O60936 208 aaKnown RBP15.29■□□□□ 0.04
SCARF1-203ENST00000434376 EPOP01588 193 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 MYOGP15173 224 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 PREPP48147 710 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 ERVFC1P60507 584 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 NFATC2Q13469 925 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 LSRQ86X29 649 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-203ENST00000434376 HS3ST5Q8IZT8 346 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 SMYD1Q8NB12 490 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 OSBPL6Q9BZF3 934 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 ALG2Q9H553 416 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 POLR1BQ9H9Y6 1135 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 PLGRKTQ9HBL7 147 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 OAZ3Q9UMX2 235 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 RBMX2Q9Y388 322 aaKnown RBP15.29■□□□□ 0.04
SCARF1-203ENST00000434376 DHRS12A0PJE2 317 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 WASH3PC4AMC7 463 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 GSTA4O15217 222 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 PGLSO95336 258 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 ZBTB11O95625 1053 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-203ENST00000434376 TSPAN12O95859 305 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 C1QCP02747 245 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 F11P03951 625 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 POLR2JP52435 117 aaKnown RBP15.29■□□□□ 0.04
SCARF1-203ENST00000434376 OR4D2P58180 307 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 CBLBQ13191 982 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 ANKRD34AQ69YU3 496 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 TMEM26Q6ZUK4 368 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 VRK3Q8IV63 474 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 CPSF7Q8N684 471 aaKnown RBP15.29■□□□□ 0.04
SCARF1-203ENST00000434376 EGLN2Q96KS0 407 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 DERL2Q9GZP9 239 aa15.29■□□□□ 0.04
SCARF1-203ENST00000434376 ELAC1Q9H777 363 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms