RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ZNF701M0R085 212 aaPredicted RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 FZD6O60353 706 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 TBL1XO60907 577 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 TULP3O75386 442 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 KCNH1O95259 989 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 SEC24AO95486 1093 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ALPLP05186 524 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ZNF7P17097 686 aaPredicted RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 POLR2IP36954 125 aaKnown RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 MTHFRP42898 656 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ALDH3A2P51648 485 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 IST1P53990 364 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 CHRNB3Q05901 458 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ELAVL2Q12926 359 aaKnown RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 TMED1Q13445 227 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 KIAA0040Q15053 153 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 PHKG1Q16816 387 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 FAM174BQ3ZCQ3 159 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 KLHL35Q6PF15 583 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 DHRS4L2Q6PKH6 230 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ENPP6Q6UWR7 440 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 DNAJC14Q6Y2X3 702 aaPredicted RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 PRR23BQ6ZRT6 265 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 OR2T12Q8NG77 320 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 OR10A6Q8NH74 314 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 FBXO30Q8TB52 745 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 SLC13A3Q8WWT9 602 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 IKZF5Q9H5V7 419 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ASB8Q9H765 288 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 LTB4R2Q9NPC1 389 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 TRPM5Q9NZQ8 1165 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ANGPTL3Q9Y5C1 460 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 MKI67P46013 3256 aaKnown RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 A0A1W2PPW3 197 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 TBKBP1A7MCY6 615 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 H0YAE9 185 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 GMNNO75496 209 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 SLC25A14O95258 325 aaPredicted RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 UGT1A1P22309 533 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 UGT1A4P22310 534 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 SHMT2P34897 504 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 UGT1A3P35503 534 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 UGT1A5P35504 534 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 TUFMP49411 452 aaKnown RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 HLCSP50747 726 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 MAPK10P53779 464 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 DAG1Q14118 895 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 GPNMBQ14956 572 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 FGD3Q5JSP0 725 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 KRTCAP2Q8N6L1 136 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 PAF1Q8N7H5 531 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 PDPRQ8NCN5 879 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 OR8J3Q8NGG0 315 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 GTF2H4Q92759 462 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 PPP3R2Q96LZ3 170 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 FEM1AQ9BSK4 669 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 TBCDQ9BTW9 1192 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ING2Q9H160 280 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 ELAC1Q9H777 363 aaKnown RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 MAGEE1Q9HCI5 957 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 KLQ9UEF7 1012 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.6□□□□□ -0.55
CD44-209ENST00000433892 UTS2RQ9UKP6 389 aa11.6□□□□□ -0.55
CD44-209ENST00000433892 A0A1W2PQ45 241 aaPredicted RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 A0A1W2PQY0 241 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 A8MX80 341 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 GAPDHSO14556 408 aaPredicted RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 GSTA4O15217 222 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 MAGEB3O15480 346 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 PRSS23O95084 383 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 THRBP10828 461 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 DCKP27707 260 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 GKP32189 559 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 PLD1Q13393 1074 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 LAPTM5Q13571 262 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 C16orf72Q14CZ0 275 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 NKG7Q16617 165 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 MAPKAPK3Q16644 382 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 INO80DQ53TQ3 878 aaPredicted RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 SLC8B1Q6J4K2 584 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 CERS6Q6ZMG9 384 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 ZDHHC13Q8IUH4 622 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 HS3ST5Q8IZT8 346 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 LEMD2Q8NC56 503 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 ZNF420Q8TAQ5 688 aaPredicted RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 PIH1D2Q8WWB5 315 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 ABTB1Q969K4 478 aaPredicted RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 MYO19Q96H55 970 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 ZBTB18Q99592 522 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 FAM126AQ9BYI3 521 aaPredicted RBP11.59□□□□□ -0.55
CD44-209ENST00000433892 SMURF2Q9HAU4 748 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 STARD7Q9NQZ5 370 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 RHBDL2Q9NX52 303 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 WWOXQ9NZC7 414 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 LIMD1Q9UGP4 676 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 CIDEBQ9UHD4 219 aa11.59□□□□□ -0.55
CD44-209ENST00000433892 ADGRE2Q9UHX3 823 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms