RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 RRN3P2A6NIE6 340 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 CENPBP07199 599 aaPredicted RBP3.11□□□□□ -1.91
PTPN4-205ENST00000433888 H1F0P07305 194 aaKnown RBP3.11□□□□□ -1.91
PTPN4-205ENST00000433888 ACP2P11117 423 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 PTGER3P43115 390 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 MAGEA11P43364 429 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 COX10Q12887 443 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 DRP2Q13474 957 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 GRAPQ13588 217 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 NAB2Q15742 525 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 WDR78Q5VTH9 848 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 CYP20A1Q6UW02 462 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 Q6ZR54 194 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 ZNF554Q86TJ5 538 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 PIGZQ86VD9 579 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 METTL6Q8TCB7 284 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 SMARCE1Q969G3 411 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 NAP1L4Q99733 375 aaKnown RBP3.11□□□□□ -1.91
PTPN4-205ENST00000433888 GPATCH1Q9BRR8 931 aaKnown RBP3.11□□□□□ -1.91
PTPN4-205ENST00000433888 UBA5Q9GZZ9 404 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 ACKR4Q9NPB9 350 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 WASH6PQ9NQA3 447 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 SLC13A4Q9UKG4 626 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 MOB4Q9Y3A3 225 aa3.11□□□□□ -1.91
PTPN4-205ENST00000433888 HCFC1P51610 2035 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-205ENST00000433888 SOCS3O14543 225 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 TMCC2O75069 709 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 NDUFS3O75489 264 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 HIST1H2ABP04908 130 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 GPIP06744 558 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 CAPN2P17655 700 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 HIST1H2ADP20671 130 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 EFNA1P20827 205 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-205ENST00000433888 RGS2P41220 211 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 MSH2P43246 934 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 CCT5P48643 541 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 GPR143P51810 404 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 RAPSNQ13702 412 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 NECTIN1Q15223 517 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 MEP1AQ16819 746 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 TAF1BQ53T94 588 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-205ENST00000433888 ACAD10Q6JQN1 1059 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 CORO6Q6QEF8 472 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 HIST3H2AQ7L7L0 130 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 SMAP1Q8IYB5 467 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-205ENST00000433888 HACE1Q8IYU2 909 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 HJURPQ8NCD3 748 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-205ENST00000433888 OR4C3Q8NH37 302 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 SGK494Q96LW2 274 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 NSMCE3Q96MG7 304 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 KRT12Q99456 494 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 LRRC61Q9BV99 259 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 TERF2IPQ9NYB0 399 aa3.1□□□□□ -1.91
PTPN4-205ENST00000433888 H3BQ06 376 aaPredicted RBP3.09□□□□□ -1.91
PTPN4-205ENST00000433888 KLF11O14901 512 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 PIGNO95427 931 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 CLDN1O95832 211 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 PYGLP06737 847 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 PGFP49763 221 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 RPS18P62269 152 aaKnown RBP3.09□□□□□ -1.91
PTPN4-205ENST00000433888 TFAP4Q01664 338 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 NIPAL4Q0D2K0 466 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 ELAVL2Q12926 359 aaKnown RBP3.09□□□□□ -1.91
PTPN4-205ENST00000433888 NFATC2Q13469 925 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 SGSM1Q2NKQ1 1148 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 SLC25A30Q5SVS4 291 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 ZDHHC20Q5W0Z9 365 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 LINGO4Q6UY18 593 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 GLDNQ6ZMI3 551 aaPredicted RBP3.09□□□□□ -1.91
PTPN4-205ENST00000433888 Q6ZRP5 223 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 TICAM2Q86XR7 235 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 TSPYL6Q8N831 410 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 OR1J1Q8NGS3 322 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 DYRK2Q92630 601 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 ZNF582Q96NG8 517 aaPredicted RBP3.09□□□□□ -1.91
PTPN4-205ENST00000433888 MYADMQ96S97 322 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 FUCA2Q9BTY2 467 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 ATP13A3Q9H7F0 1226 aa3.09□□□□□ -1.91
PTPN4-205ENST00000433888 IGHV3OR16-10A0A075B7F0 116 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 KPNA7A9QM74 516 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 E9PI62 339 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 TNFAIP3P21580 790 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 GSDMDP57764 484 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 B3GALT5-AS1P59052 145 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 ALFQ53S48 1182 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 TMEM198Q66K66 360 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 ARHGAP12Q8IWW6 846 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 C11orf53Q8IXP5 236 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 MARVELD2Q8N4S9 558 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 ESX1Q8N693 406 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 MAPKAPK5-AS1Q8N8E1 139 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 OR5AP2Q8NGF4 316 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 SUSD6Q92537 303 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 DAZLQ92904 295 aaKnown RBP3.08□□□□□ -1.92
PTPN4-205ENST00000433888 ZUFSPQ96AP4 578 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 SOSTQ9BQB4 213 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 TRIM6Q9C030 488 aaPredicted RBP3.08□□□□□ -1.92
PTPN4-205ENST00000433888 WWTR1Q9GZV5 400 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 ARHGAP26Q9UNA1 814 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms