RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 ZNF449Q6P9G9 518 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 FAM199XQ6PEV8 388 aaPredicted RBP13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 DET1Q7L5Y6 550 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 SNX20Q7Z614 316 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 CDKL3Q8IVW4 592 aaPredicted RBP13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 GALNT11Q8NCW6 608 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 MR1Q95460 341 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 HAUS1Q96CS2 278 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 COPS8Q99627 209 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 DPH2Q9BQC3 489 aaPredicted RBP13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 SLC25A23Q9BV35 468 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 FICDQ9BVA6 458 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 ING2Q9H160 280 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 VPS37BQ9H9H4 285 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 SOHLH2Q9NX45 425 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 CRLS1Q9UJA2 301 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 VPS4AQ9UN37 437 aa13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 G3BP2Q9UN86 482 aaKnown RBP13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
GCSHP3-201ENST00000431120 IFRD1O00458 451 aaPredicted RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 SGTAO43765 313 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 HBQ1P09105 142 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 ATP1B2P14415 290 aaPredicted RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 CDH3P22223 829 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 PTPN7P35236 360 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 KPNA2P52292 529 aaKnown RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 MLLT10P55197 1068 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 GPS2Q13227 327 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 MSLNQ13421 630 aaPredicted RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 SPA17Q15506 151 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 GPR19Q15760 415 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 PLEKHS1Q5SXH7 462 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 CCDC181Q5TID7 509 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 CERS6Q6ZMG9 384 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 CFAP206Q8IYR0 622 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 DSELQ8IZU8 1212 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 NXPE1Q8N323 547 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 LCN9Q8WX39 176 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 RMDN2Q96LZ7 410 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 PSMG3-AS1Q96PY0 264 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 TRIM55Q9BYV6 548 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 PITPNM3Q9BZ71 974 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 SRMSQ9H3Y6 488 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 TFB2MQ9H5Q4 396 aaKnown RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 AKIRIN1Q9H9L7 192 aaPredicted RBP13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 FKBPLQ9UIM3 349 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 SERTAD3Q9UJW9 196 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
GCSHP3-201ENST00000431120 IGLV3-16A0A075B6K0 115 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 TTLL8A6PVC2 850 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 F5H423 210 aaPredicted RBP13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 CEACAM4O75871 244 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 PDGFAP04085 211 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 POLBP06746 335 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 POLR2CP19387 275 aaPredicted RBP13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 CTNNA1P35221 906 aaKnown RBP13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 RORAP35398 523 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 CETN2P41208 172 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 ZNF140P52738 457 aaPredicted RBP13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 PTPRCAPQ14761 206 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 DUS1LQ6P1R4 473 aaKnown RBP13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 MED25Q71SY5 747 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 DAAM2Q86T65 1068 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 KLHDC8BQ8IXV7 354 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 OR4E2Q8NGC2 313 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 ACTL9Q8TC94 416 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 ADAMTS17Q8TE56 1095 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 C17orf62Q9BQA9 187 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 GORASP1Q9BQQ3 440 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 HEMGNQ9BXL5 484 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 CHST8Q9H2A9 424 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 MVB12BQ9H7P6 319 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 SNX7Q9UNH6 387 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 PCDHA13Q9Y5I0 950 aa13.17□□□□□ -0.3
GCSHP3-201ENST00000431120 MED13Q9UHV7 2174 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 TRBV5-4A0A0C4DH59 114 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 CCDC66A2RUB6 948 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 SLC9B1P1A6NJY1 282 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 H7C0S8 307 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 DNAJB5O75953 348 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 TJP3O95049 919 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 RBP3P10745 1247 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 CTNNA2P26232 953 aa13.16□□□□□ -0.3
GCSHP3-201ENST00000431120 PRDX3P30048 256 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms