RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 ST6GALNAC3Q8NDV1 305 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 GLYATL1Q969I3 302 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 TRIM44Q96DX7 344 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 VPS50Q96JG6 964 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 SLC41A2Q96JW4 573 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 CNDP1Q96KN2 507 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 GBP5Q96PP8 586 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 SMAD5Q99717 465 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 MAP3K3Q99759 626 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 DPH2Q9BQC3 489 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 DHRS4Q9BTZ2 278 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 TDRD1Q9BXT4 1180 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 UNKQ9C0B0 810 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 RAB33BQ9H082 229 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 GANQ9H2C0 597 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 EPS8L2Q9H6S3 715 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 ZFYVE1Q9HBF4 777 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 SYTL2Q9HCH5 934 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 SLC40A1Q9NP59 571 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 HRASLS2Q9NWW9 162 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 CWC15Q9P013 229 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 FAM8A1Q9UBU6 413 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 AMACRQ9UHK6 382 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 SERTAD3Q9UJW9 196 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 PPIL1Q9Y3C6 166 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 OTOGQ6ZRI0 2925 aa7.66□□□□□ -1.18
ECHDC1-207ENST00000430841 GSAPA4D1B5 854 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 FADS2P1A8MWK0 482 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 TMEM150CB9EJG8 249 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MATN2O00339 956 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MAFKO60675 156 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 ZG16O60844 167 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 KCNJ13O60928 360 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CEACAM4O75871 244 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 SLC35G4P0C7Q5 338 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 HLA-DPA1P20036 260 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 AMPD1P23109 780 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 ITGA3P26006 1051 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 PBLDP30039 288 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 AKT1P31749 480 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 PTGER4P35408 488 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 GJC1P36383 396 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 PREPP48147 710 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CASP6P55212 293 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 DSC2Q02487 901 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CDC16Q13042 620 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 GPS2Q13227 327 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MYBPC3Q14896 1274 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 NCF4Q15080 339 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 LLGL1Q15334 1064 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 ZRSR2Q15696 482 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 PLEKHN1Q494U1 663 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 BOLA3Q53S33 107 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MLIPQ5VWP3 458 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 SP5Q6BEB4 398 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MRGPREQ86SM8 312 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 FJX1Q86VR8 437 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 AMZ2Q86W34 360 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CARFQ8N187 725 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CBARPQ8N350 705 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 GALNT16Q8N428 558 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 TRAM1L1Q8N609 369 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 GOLGA6L1Q8N7Z2 621 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MAGEB10Q96LZ2 347 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CSPG4P5Q96PW8 444 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 PCDHB18PQ96TA0 734 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 WDR77Q9BQA1 342 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 TLR10Q9BXR5 811 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 ACBD3Q9H3P7 528 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 CHST11Q9NPF2 352 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 LATS2Q9NRM7 1088 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 TXLNGQ9NUQ3 528 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 RBM22Q9NW64 420 aaKnown RBP eCLIP7.65□□□□□ -1.187e-6■■■■□ 24.6
ECHDC1-207ENST00000430841 ZNF624Q9P2J8 865 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 MYO1AQ9UBC5 1043 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 PSMD13Q9UNM6 376 aa7.65□□□□□ -1.18
ECHDC1-207ENST00000430841 APCP25054 2843 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 OR5K3A6NET4 321 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 E7EQ34 232 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 MTX2O75431 263 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 POU3F2P20265 443 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 IL4RP24394 825 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 NDUFS1P28331 727 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 DNAJA1P31689 397 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 CD86P42081 329 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 ARCN1P48444 511 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 KLK7P49862 253 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 TERF1P54274 439 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 JAM2P57087 298 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 DCDC1P59894 354 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 UBE2HP62256 183 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 UBXN1Q04323 297 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 MAMLD1Q13495 774 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 GALNT3Q14435 633 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 PPP2R5EQ16537 467 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 DPYSL2Q16555 572 aa7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 IFI16Q16666 785 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-207ENST00000430841 HADHQ16836 314 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms