RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ADAMDEC1O15204 470 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 COCHO43405 550 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 NIPAL4Q0D2K0 466 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 NDUFA9Q16795 377 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 TIGD2Q4W5G0 525 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 MARCH8Q5T0T0 291 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 LRRC3Q9BY71 257 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 COL4A1P02462 1669 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 IL23RQ5VWK5 629 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 IKZF3Q9UKT9 509 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 PIP5K1BO14986 540 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 TRIM24O15164 1050 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 AKT2P31751 481 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ASB9Q96DX5 294 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 SOHLH2Q9NX45 425 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 AHSGP02765 367 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 BUD31P41223 144 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 MAGEA6P43360 314 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CSNK2BP67870 215 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 NFKB2Q00653 900 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 GCNT6Q5T4J0 391 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CRTC3Q6UUV7 619 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 OSBPL7Q9BZF2 842 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 WDR55Q9H6Y2 383 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 PTGESO14684 152 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 NPC1O15118 1278 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 PENKP01210 267 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 HNF4AP41235 474 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CAPZA2P47755 286 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 OFCC1Q8IZS5 231 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 KCNJ9Q92806 393 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 RAB7BQ96AH8 199 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 RAD51AP1Q96B01 352 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 POLMQ9NP87 494 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 EIF2B4Q9UI10 523 aaKnown RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 GMPPBQ9Y5P6 360 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 TYRP14679 529 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 SSR2P43308 183 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 RPL5P46777 297 aaKnown RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 TRIM16LQ309B1 348 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 SFRP1Q8N474 314 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 PNPT1Q8TCS8 783 aaKnown RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CAPN10Q9HC96 672 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 IMP3Q9NV31 184 aaKnown RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CACNG4Q9UBN1 327 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 C2orf71A6NGG8 1288 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 HSMCR30P0CW71 290 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 PIK3CBP42338 1070 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 SPIBQ01892 262 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 NAE1Q13564 534 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 TMEM220Q6QAJ8 160 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 NRSN1Q8IZ57 195 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 TSPEARQ8WU66 669 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CENPNQ96H22 339 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 H3BNH8 94 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 ECI2O75521 394 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 UGT2B17O75795 530 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CAPN1P07384 714 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 KCNQ1P51787 676 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CCDC85BQ15834 202 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 SLC39A5Q6ZMH5 540 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 GALNT7Q86SF2 657 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 ING5Q8WYH8 240 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 ZMYND8Q9ULU4 1186 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-208ENST00000430669 GSAPA4D1B5 854 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 HIST1H2ABP04908 130 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 PPP4R4Q6NUP7 873 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 C22orf39Q6P5X5 142 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 HIST3H2AQ7L7L0 130 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 OR14C36Q8NHC7 312 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 FEM1AQ9BSK4 669 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 CALML5Q9NZT1 146 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 RIMKLBQ9ULI2 386 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 NENFQ9UMX5 172 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
PTCH1-208ENST00000430669 ENO4A6NNW6 628 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ISM1B1AKI9 464 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 EDIL3O43854 480 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 MED26O95402 600 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ITPKAP23677 461 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 MAPK12P53778 367 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 TAS2R41P59536 307 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 LIX1Q8N485 282 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ZBED6CLQ96FA7 236 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-208ENST00000430669 IL23AQ9NPF7 189 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 RGS5O15539 181 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 SLC28A2O43868 658 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 LRATO95237 230 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 PRPS1L1P21108 318 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 IGFBP4P22692 258 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-208ENST00000430669 SLC16A5O15375 505 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 BEST1O76090 585 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 CCNYL3P0C7X3 344 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms