RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ZBTB44Q8NCP5 570 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 SGTBQ96EQ0 304 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 FSD1LQ9BXM9 530 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 PRM3Q9NNZ6 103 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 SCN4AP35499 1836 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 ARHGAP33O14559 1287 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 ZNF780AO75290 641 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 APOC1P02654 83 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 ADGRF2Q8IZF7 708 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 CARNMT1Q8N4J0 409 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 NCLNQ969V3 563 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 LGALS12Q96DT0 336 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 SPATA9Q9BWV2 254 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 SCUBE2Q9NQ36 999 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 BTN3A1O00481 513 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 HS6ST1O60243 411 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CD36P16671 472 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 MPSTP25325 297 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CD52P31358 61 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 NOS2P35228 1153 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 HTR3AP46098 478 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 GEMP55040 296 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 MLLT10P55197 1068 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 IFITM3Q01628 133 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 SWI5Q1ZZU3 235 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 PRMT9Q6P2P2 845 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ZNF540Q8NDQ6 660 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 DNAJA4Q8WW22 397 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 NFKBIZQ9BYH8 718 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 MAGED2Q9UNF1 606 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CPB1P15086 417 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ALAS2P22557 587 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 HTR1BP28222 390 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CLCNKBP51801 687 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 LIMK2P53671 638 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 POLR2GP62487 172 aaKnown RBP eCLIP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 SNX20Q7Z614 316 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 SH3KBP1Q96B97 665 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 PAWRQ96IZ0 340 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ELMO2Q96JJ3 720 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 MAGEB10Q96LZ2 347 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 TRNT1Q96Q11 434 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 FBXO8Q9NRD0 319 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 GTF2IRD1Q9UHL9 959 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 MEIOCA2RUB1 952 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 NR5A2O00482 541 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 RASAL1O95294 804 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 RBP1P09455 135 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 DNAJB1P25685 340 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 PSMB4P28070 264 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CCND3P30281 292 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 VEGFBP49765 207 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ACLYP53396 1101 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ERVFC1P60507 584 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 MRPS5P82675 430 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CREB5Q02930 508 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 TRIP4Q15650 581 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 FUT11Q495W5 492 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 PITRM1Q5JRX3 1037 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 TRMT10BQ6PF06 316 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 LINC00518Q8N0U6 118 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 SETD9Q8NE22 299 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM83FQ8NEG4 500 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 FRMD6Q96NE9 622 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 BCL7BQ9BQE9 202 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 SLC22A4Q9H015 551 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 POMCP01189 267 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ITGA2P17301 1181 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 DGKQP52824 942 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 GPR68Q15743 365 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 SPATA2LQ8IUW3 424 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 LILRB2Q8N423 598 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 TP53I13Q8NBR0 393 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 ASZ1Q8WWH4 475 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 RBBP8Q99708 897 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 NXF3Q9H4D5 531 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CAB39LQ9H9S4 337 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 NOSIPQ9Y314 301 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 U3KQV3 271 aa14.22□□□□□ -0.13
SYNGAP1-203ENST00000428982 CASTOR2A6NHX0 329 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 AGAP5A6NIR3 686 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 PLATP00750 562 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 FGF3P11487 239 aaPredicted RBP14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 MATKP42679 507 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 ERVK-21P61565 698 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 CYP4F2P78329 520 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 CYP4F3Q08477 520 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 INCA1Q0VD86 236 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAPQ12884 760 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 RFTN1Q14699 578 aaPredicted RBP14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 CCDC142Q17RM4 750 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM209BQ5JX69 171 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 STEAP4Q687X5 459 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 SLC22A9Q8IVM8 553 aa14.21□□□□□ -0.13
SYNGAP1-203ENST00000428982 FNDC5Q8NAU1 212 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms