RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CCL4L1Q8NHW4 92 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 LMX1AQ8TE12 382 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 EEF1AKMT1Q8WVE0 214 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ATOH1Q92858 354 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 EXT2Q93063 718 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 NXNL1Q96CM4 212 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 LOXL4Q96JB6 756 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 RMDN2Q96LZ7 410 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 FOPNLQ96NB1 174 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 DERL2Q9GZP9 239 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 WWP1Q9H0M0 922 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARRDC1-AS1Q9H2J1 176 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ALG9Q9H6U8 611 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CAAP1Q9H8G2 361 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 NMRAL1Q9HBL8 299 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 IGSF5Q9NSI5 407 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 MKS1Q9NXB0 559 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 NKIRAS1Q9NYS0 192 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 XPR1Q9UBH6 696 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SPASTQ9UBP0 616 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 GULP1Q9UBP9 304 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 KLF15Q9UIH9 416 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 GMEB2Q9UKD1 530 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACSL5Q9ULC5 683 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PSMD13Q9UNM6 376 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PCDHGA5Q9Y5G8 931 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLXND1Q9Y4D7 1925 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CACNA1IQ9P0X4 2223 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 BPTFQ12830 3046 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 MUC6Q6W4X9 2439 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 TMEM120BA0PK00 339 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CDC7O00311 574 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 FFAR2O15552 330 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZBTB14O43829 449 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 KCNJ13O60928 360 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 GPC4O75487 556 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 KLHL2O95198 593 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 GSTA1P08263 222 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 MPC1LP0DKB6 136 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CD1DP15813 335 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 NR1D1P20393 614 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 PDHA2P29803 388 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CRHR1P34998 444 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ATXN3P54252 364 aaPredicted RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 IRX4P78413 519 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 IL9RQ01113 521 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 BNC1Q01954 994 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 DLG1Q12959 904 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ABRQ12979 859 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 SP140Q13342 867 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 KRT33BQ14525 404 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 GBX1Q14549 363 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 N4BP2L1Q5TBK1 243 aaPredicted RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 METRNLQ641Q3 311 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 TCEAL6Q6IPX3 200 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 DUS1LQ6P1R4 473 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 C16orf46Q6P387 395 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 IL27RAQ6UWB1 636 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CDHR3Q6ZTQ4 885 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 NEK10Q6ZWH5 1172 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ADAMTSL2Q86TH1 951 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 GKN2Q86XP6 184 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLD6Q8N2A8 252 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 FSTL5Q8N475 847 aaPredicted RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM46DQ8NEK8 389 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 SPDYE1Q8NFV5 336 aaPredicted RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 MGARPQ8TDB4 240 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 TCEAL3Q969E4 200 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 UBXN10Q96LJ8 280 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ELF4Q99607 663 aaPredicted RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 GTPBP2Q9BX10 602 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 NUSAP1Q9BXS6 441 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 IRF2BPLQ9H1B7 796 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 DPEP2Q9H4A9 486 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 SMOC1Q9H4F8 434 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ERVMER34-1Q9H9K5 563 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CAPN10Q9HC96 672 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRDM8Q9NQV8 689 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 IMP3Q9NV31 184 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM86C1Q9NVL1 165 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZNF358Q9NW07 568 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 TAAR2Q9P1P5 351 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CPSF2Q9P2I0 782 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 TBC1D29Q9UFV1 150 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 DCDC2Q9UHG0 476 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 RNF112Q9ULX5 631 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC6A14Q9UN76 642 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CDYLQ9Y232 598 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 ASF1AQ9Y294 204 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 CFAP20Q9Y6A4 193 aaKnown RBP7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRPM6Q9BX84 2022 aa7.74□□□□□ -1.17
HMGA1P4-201ENST00000428643 LRRK1Q38SD2 2015 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 OR52A4PA6NMU1 304 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 B4DGG1 531 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SUPT3HB4E1H0 165 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms