RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CEP41Q9BYV8 373 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 ABCB10Q9NRK6 738 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 AIG1Q9NVV5 245 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 CCDC59Q9P031 241 aaKnown RBP5.07□□□□□ -1.6
RIF1-203ENST00000428287 CREBBPQ92793 2442 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 ZBTB24O43167 697 aaPredicted RBP5.07□□□□□ -1.6
RIF1-203ENST00000428287 MFSD11O43934 449 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 GSTM1P09488 218 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 CD9P21926 228 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 ALAS2P22557 587 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 PRKACBP22694 351 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 BDNFP23560 247 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 PCDH1Q08174 1060 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 DGKZQ13574 1117 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 USP10Q14694 798 aaKnown RBP5.07□□□□□ -1.6
RIF1-203ENST00000428287 EMC2Q15006 297 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 VPS26BQ4G0F5 336 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 NXNQ6DKJ4 435 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 NAPEPLDQ6IQ20 393 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 CALHM3Q86XJ0 350 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 RDH10Q8IZV5 341 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 FAM109AQ8N4B1 249 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 NPWQ8N729 165 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 C12orf29Q8N999 325 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 OR5H6Q8NGV6 325 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 GIPC2Q8TF65 315 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 CHTF18Q8WVB6 975 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 KCTD4Q8WVF5 259 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 GTF2H4Q92759 462 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 HRASLS5Q96KN8 279 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 PPP1R2P1Q96PQ5 205 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 SETD4Q9NVD3 440 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 TCEAL9Q9UHQ7 104 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 A0A087X1B8 175 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 SLC9A3R1O14745 358 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 RECQL5O94762 991 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 C1QBP02746 253 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FTH1P02794 183 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 NR3C2P08235 984 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 CD36P16671 472 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PTPN6P29350 595 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 IFNA8P32881 189 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 RAPSNQ13702 412 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 PUS10Q3MIT2 529 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 GLYATQ6IB77 296 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DDX53Q86TM3 631 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZFAND4Q86XD8 727 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 HGDQ93099 445 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FATE1Q969F0 183 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 KCNJ15Q99712 375 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TAPBPLQ9BX59 468 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PRKD2Q9BZL6 878 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MUTYHQ9UIF7 546 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZNF221Q9UK13 617 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PCDHGB3Q9Y5G1 929 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 KALRNO60229 2985 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 USP12O75317 370 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 VPS4BO75351 444 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 EPOP01588 193 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 HLA-DQB1P01920 261 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 IL32P24001 234 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TNFSF9P41273 254 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FCHO2Q0JRZ9 810 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 UNC50Q53HI1 259 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 CCNYL1Q8N7R7 359 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 IL17RCQ8NAC3 791 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DUSP18Q8NEJ0 188 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PSMA8Q8TAA3 256 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FAM151AQ8WW52 585 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 HPDLQ96IR7 371 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MED16Q9Y2X0 877 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MED13LQ71F56 2210 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 M0R082 166 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 EPHA2P29317 976 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TIE1P35590 1138 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 GLRBP48167 497 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DIO3P55073 304 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 UBXN2AP68543 259 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 NKG7Q16617 165 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MEP1AQ16819 746 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MTERF2Q49AM1 385 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZNF678Q5SXM1 525 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 SPATA19Q7Z5L4 167 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DNAJB14Q8TBM8 379 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ANKRD49Q8WVL7 239 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 RPL10LQ96L21 214 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 RNF145Q96MT1 663 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FCRL5Q96RD9 977 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 LIN7BQ9HAP6 207 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 RUVBL2Q9Y230 463 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 TNFSF13BQ9Y275 285 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 AP1M2Q9Y6Q5 423 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 A0A0B4J293 547 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 LCHNA4D1U4 455 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MROH6A6NGR9 719 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 LOC110117498-PIK3R3F6TDL0 507 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DDX39AO00148 427 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZNF37AP17032 561 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms