RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
DEPDC7-203ENST00000427755 IGLV3-16A0A075B6K0 115 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 C17orf113A0A1B0GUU1 675 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 CCL22O00626 93 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 KCNN4O15554 427 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 LDB2O43679 373 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 SCRG1O75711 98 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 RBP3P10745 1247 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 POLR2CP19387 275 aaPredicted RBP12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 NDUFS1P28331 727 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 MLLT10P55197 1068 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 EIF3EP60228 445 aaKnown RBP12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 ABRQ12979 859 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 ZNF789Q5FWF6 425 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 PLEKHS1Q5SXH7 462 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 IZUMO3Q5VZ72 239 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 CPZQ66K79 652 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 LCN10Q6JVE6 187 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 SYVN1Q86TM6 617 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 TMEM126BQ8IUX1 230 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 CDKL3Q8IVW4 592 aaPredicted RBP12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 TEX19Q8NA77 164 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 OR4E2Q8NGC2 313 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 CCDC110Q8TBZ0 833 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 THAP4Q8WY91 577 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 ULK4Q96C45 1275 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 DCUN1D1Q96GG9 259 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 LRFN5Q96NI6 719 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 NRTNQ99748 197 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 CCM2Q9BSQ5 444 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 TLR10Q9BXR5 811 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 OSBPL8Q9BZF1 889 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 OR52A5Q9H2C5 316 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 FAM96AQ9H5X1 160 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 CRLS1Q9UJA2 301 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 FARSAQ9Y285 508 aaKnown RBP12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 DUSP10Q9Y6W6 482 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 COLEC10Q9Y6Z7 277 aa12.7□□□□□ -0.38
DEPDC7-203ENST00000427755 NBASA2RRP1 2371 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 SLC9B1P1A6NJY1 282 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 DDX3YO15523 660 aaKnown RBP12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 CRTAMO95727 393 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 ATP1B2P14415 290 aaPredicted RBP12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 ITGALP20701 1170 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 CTNNA2P26232 953 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 RORAP35398 523 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 CDKN1CP49918 316 aaPredicted RBP12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 RPS15P62841 145 aaKnown RBP12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 TMPRSS15P98073 1019 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 PDE1BQ01064 536 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 GSE1Q14687 1217 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 SPA17Q15506 151 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 CCDC181Q5TID7 509 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 ARMC6Q6NXE6 501 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 AADACL2Q6P093 401 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 SNX20Q7Z614 316 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 ACVR1CQ8NER5 493 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 ADAMTS17Q8TE56 1095 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 ALG3Q92685 438 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 MR1Q95460 341 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 DNAJC1Q96KC8 554 aaKnown RBP12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 COPS8Q99627 209 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 TBL1YQ9BQ87 522 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 CHST8Q9H2A9 424 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 COG4Q9H9E3 785 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 MLXIPLQ9NP71 852 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 C1GALT1Q9NS00 363 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 SOHLH2Q9NX45 425 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 HEBP2Q9Y5Z4 205 aa12.69□□□□□ -0.38
DEPDC7-203ENST00000427755 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 SOWAHDA6NJG2 315 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 H7C0S8 307 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 MEN1O00255 615 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 MATN2O00339 956 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 BTN3A3O00478 584 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 BTN3A1O00481 513 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 CAPN1P07384 714 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 RAB40ALP0C0E4 278 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 MSL3P1P0C860 447 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PRSS56P0CW18 603 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 RALBP11234 206 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PDHA2P29803 388 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PRDX3P30048 256 aaKnown RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 HADHAP40939 763 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 CHAF1BQ13112 559 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 TMTC4Q5T4D3 741 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 DARS2Q6PI48 645 aaKnown RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 DSELQ8IZU8 1212 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 FAM26EQ8N5C1 309 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 LRRC57Q8N9N7 239 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 OR1L3Q8NH93 324 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 HEXDCQ8WVB3 486 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms