RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 DPP6P42658 865 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 RAB13P51153 203 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TKTL1P51854 596 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 EPHA4P54764 986 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GDF10P55107 478 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 FCGRTP55899 365 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PER3P56645 1201 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 BTG1P62324 171 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DYNLL1P63167 89 aaKnown RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 UBXN2AP68543 259 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC35A2P78381 396 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP24A1Q07973 514 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF543Q08ER8 600 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 MGAT3Q09327 533 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CDH17Q12864 832 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DMP1Q13316 513 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ORC1Q13415 861 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ADAM15Q13444 863 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SURF1Q15526 300 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 AANATQ16613 207 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 IMPG1Q17R60 797 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM83EQ2M2I3 478 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 OTUD3Q5T2D3 398 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 METTL11BQ5VVY1 283 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMEM236Q5W0B7 351 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CES4AQ5XG92 561 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TRIQKQ629K1 86 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 KANK2Q63ZY3 851 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LRRC66Q68CR7 880 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLFN12LQ6IEE8 588 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CAPN13Q6MZZ7 669 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMEM65Q6PI78 240 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 METAP1DQ6UB28 335 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GK5Q6ZS86 529 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 BEND4Q6ZU67 534 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 EIF3MQ7L2H7 374 aaKnown RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 OVCH2Q7RTZ1 564 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 NRARPQ7Z6K4 114 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TSPYL5Q86VY4 417 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SIAH1Q8IUQ4 282 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DCP1BQ8IZD4 617 aaKnown RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DEPDC4Q8N2C3 294 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GHDCQ8N2G8 530 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GPD1LQ8N335 351 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LILRB2Q8N423 598 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TTC29Q8NA56 475 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF540Q8NDQ6 660 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LPCAT1Q8NF37 534 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CLHC1Q8NHS4 586 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SHKBP1Q8TBC3 707 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 UBASH3BQ8TF42 649 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 STYXQ8WUJ0 223 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ST8SIA4Q92187 359 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 YIPF5Q969M3 257 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 MYLPFQ96A32 169 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PTERQ96BW5 349 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 C10orf90Q96M02 699 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DMRTB1Q96MA1 342 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF145Q96MT1 663 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GPR137Q96N19 417 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCDC115Q96NT0 180 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ERMAPQ96PL5 475 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 FERD3LQ96RJ6 166 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 RIT2Q99578 217 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 C12orf57Q99622 126 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ACO2Q99798 780 aaKnown RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 HSD17B14Q9BPX1 270 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 WACQ9BTA9 647 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 BBS2Q9BXC9 721 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 AMNQ9BXJ7 453 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LHX5Q9H2C1 402 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF395Q9H8N7 513 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP3A43Q9HB55 503 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 EMC7Q9NPA0 242 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ACOT13Q9NPJ3 140 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMPRSS4Q9NRS4 437 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCNH7Q9NS40 1196 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CATSPERZQ9NTU4 200 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 IMP3Q9NV31 184 aaKnown RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SETD4Q9NVD3 440 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 FBXL12Q9NXK8 326 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCDC167Q9P0B6 97 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 VAV3Q9UKW4 847 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PLCL2Q9UPR0 1127 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LIPT1Q9Y234 373 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 BTRCQ9Y297 605 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ACOT9Q9Y305 439 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ACTL7AQ9Y615 435 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 AP1M2Q9Y6Q5 423 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DOT1LQ8TEK3 1739 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 NRCAMQ92823 1304 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A0G2JMP0 313 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A0J9YYE9 177 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 IQCMA0A1B0GVH7 501 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 hCG_1807616A0A1W2PRN6 198 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 E2F8A0AVK6 867 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR2A25A4D2G3 310 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PTGES3LE9PB15 166 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 STX16-NPEPL1H3BU86 382 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms