RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SMAD5Q99717 465 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ASB8Q9H765 288 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AKIRIN1Q9H9L7 192 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ATP13A2Q9NQ11 1180 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 IRAK4Q9NWZ3 460 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CRLS1Q9UJA2 301 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 B3GNT3Q9Y2A9 372 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TLN1Q9Y490 2541 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 C17orf113A0A1B0GUU1 675 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ANKUB1A6NFN9 424 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 F8W8V4 182 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AURKAO14965 403 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 LDB2O43679 373 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SPOPO43791 374 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TMEM253P0C7T8 217 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PIM1P11309 404 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TNNT1P13805 278 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PTPN3P26045 913 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 OTX2P32243 289 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FOLR3P41439 243 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC1A5Q15758 541 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SIRPB2Q5JXA9 342 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CCDC181Q5TID7 509 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC6A19Q695T7 634 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ITPRIPL1Q6GPH6 555 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZNF517Q6ZMY9 492 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 B4GALNT4Q76KP1 1039 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 DAAM2Q86T65 1068 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 IPMKQ8NFU5 416 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GPR150Q8NGU9 434 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC35G2Q8TBE7 412 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 HM13Q8TCT9 377 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TADA1Q96BN2 335 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PTERQ96BW5 349 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RBM41Q96IZ5 413 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CCDC42Q96M95 316 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ALS2CR12Q96Q35 445 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FCRL5Q96RD9 977 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RUFY1Q96T51 708 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AP1M1Q9BXS5 423 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 MVB12BQ9H7P6 319 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SMOXQ9NWM0 555 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FAM8A1Q9UBU6 413 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AAR2Q9Y312 384 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SPO11Q9Y5K1 396 aa11.93□□□□□ -0.5
HLA-DQB3-203ENST00000425319 DOPEY2Q9Y3R5 2298 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CCDC66A2RUB6 948 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 HACD1B0YJ81 288 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZNF189O75820 626 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PRAMEF1O95521 474 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 MSL3P1P0C860 447 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NFKB1P19838 968 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ITGALP20701 1170 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PRDX3P30048 256 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CETN2P41208 172 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ARCN1P48444 511 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CD151P48509 253 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 KPNA2P52292 529 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CTSCP53634 463 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PPP1CAP62136 330 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 MRPL49Q13405 166 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 IL10RAQ13651 578 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TRIM14Q14142 442 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NCF4Q15080 339 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NR6A1Q15406 480 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TAF1AQ15573 450 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CYP2A13Q16696 494 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 KHDC1Q4VXA5 237 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NPNTQ6UXI9 565 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CISD2Q8N5K1 135 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ADAMTS17Q8TE56 1095 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NACC2Q96BF6 587 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SNRNP40Q96DI7 357 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TCTN2Q96GX1 697 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 LINC00615Q96LM1 132 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 COPS8Q99627 209 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NUDT9Q9BW91 350 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 LUZP4Q9P127 313 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 IFT80Q9P2H3 777 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RSPH14Q9UHP6 348 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 POMT2Q9UKY4 750 aa11.92□□□□□ -0.5
HLA-DQB3-203ENST00000425319 F5H423 210 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZNF749O43361 778 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 BUD23O43709 281 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CST8O60676 142 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 OR2B3O76000 313 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SRP72O76094 671 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZRANB2O95218 330 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GSTM1P09488 218 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ATP1B2P14415 290 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ITGAXP20702 1163 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 DCDP81605 110 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GSTM4Q03013 218 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RPA4Q13156 261 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms