RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FAM109BQ6ICB4 259 aaPredicted RBP11.71□□□□□ -0.53
PTPRN-204ENST00000423636 GCNT7Q6ZNI0 430 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 CMTR2Q8IYT2 770 aaKnown RBP11.71□□□□□ -0.53
PTPRN-204ENST00000423636 ALG2Q9H553 416 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 FNIP2Q9P278 1114 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM181Q9P2C4 612 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.71□□□□□ -0.53
PTPRN-204ENST00000423636 DHRS7Q9Y394 339 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 CFAP20Q9Y6A4 193 aaKnown RBP11.71□□□□□ -0.53
PTPRN-204ENST00000423636 MICAL3Q7RTP6 2002 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 PRSS51A0A1B0GVH4 220 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.54
PTPRN-204ENST00000423636 FZD6O60353 706 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 PAX3P23760 479 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 RPIAP49247 311 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 CHN2P52757 468 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 INHBCP55103 352 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 MEF2AQ02078 507 aaPredicted RBP11.71□□□□□ -0.54
PTPRN-204ENST00000423636 CYP20A1Q6UW02 462 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 UGT2A3Q6UWM9 527 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 HSD11B1LQ7Z5J1 315 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 LIX1Q8N485 282 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 ZBTB2Q8N680 514 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 METTL25Q8N6Q8 603 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 FAM47BQ8NA70 645 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 RHEBL1Q8TAI7 183 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 C2orf15Q8WU43 125 aaKnown RBP11.71□□□□□ -0.54
PTPRN-204ENST00000423636 KCNJ9Q92806 393 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 CDK5RAP1Q96SZ6 601 aaKnown RBP11.71□□□□□ -0.54
PTPRN-204ENST00000423636 VAPAQ9P0L0 249 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 OPTCQ9UBM4 332 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 TMPRSS11EQ9UL52 423 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 OGDHLQ9ULD0 1010 aa11.71□□□□□ -0.54
PTPRN-204ENST00000423636 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.54
PTPRN-204ENST00000423636 NINQ8N4C6 2090 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TRAV19A0A0A6YYK7 116 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TMX2-CTNND1H3BSU7 103 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ZNF189O75820 626 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 IGSF6O95976 241 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 STATHP02808 62 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 MYCLP1P12525 358 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SERPINA4P29622 427 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SUOXP51687 545 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 RHDQ02161 417 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 PRKCQQ04759 706 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 C5orf22Q49AR2 442 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SAMD4BQ5PRF9 694 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 IER5LQ5T953 404 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TBPL2Q6SJ96 375 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 RBM44Q6ZP01 1051 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 CHST9Q7L1S5 443 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 DCAF4L2Q8NA75 395 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ACAT2Q9BWD1 397 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 P2RY12Q9H244 342 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ACTL8Q9H568 366 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 RPF2Q9H7B2 306 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 DNMT3BQ9UBC3 853 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 CD300AQ9UGN4 299 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 DLGAP4Q9Y2H0 992 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 DHRS12A0PJE2 317 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 WDR47O94967 919 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 STAMBPO95630 424 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ESR1P03372 595 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 UROSP10746 265 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ACRV1P26436 265 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 HALP42357 657 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ATP6V0D1P61421 351 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SMARCB1Q12824 385 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ALG1LQ6GMV1 187 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TCEAL8Q8IYN2 117 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 RGL4Q8IZJ4 473 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 GPR156Q8NFN8 814 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 BADQ92934 168 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TRMOQ9BU70 441 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SUV39H2Q9H5I1 410 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SDR39U1Q9NRG7 319 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 EI24O14681 340 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 NOBOXO60393 691 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 HSPA1AP0DMV8 641 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 HSPA1BP0DMV9 641 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ZNF23P17027 643 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ZNF26P17031 533 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 GSTT1P30711 240 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 MAPRE2Q15555 327 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 CNPY1Q3B7I2 92 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TPGS2Q68CL5 300 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 KRT80Q6KB66 452 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 SUSD1Q6UWL2 747 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 Q6ZNB5 142 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 UBE2R2Q712K3 238 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TMC8Q8IU68 726 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ST13P4Q8IZP2 240 aaPredicted RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ZNF786Q8N393 782 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 ITFG1Q8TB96 612 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms