RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 KLHL35Q6PF15 583 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 PRUNE1Q86TP1 453 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 RASGRP3Q8IV61 690 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 PIANPQ8IYJ0 282 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 ESX1Q8N693 406 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 GALNT6Q8NCL4 622 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 STARD8Q92502 1023 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 UBXN4Q92575 508 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 SLC41A2Q96JW4 573 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 NAPGQ99747 312 aaPredicted RBP14.81□□□□□ -0.04
USB1-202ENST00000423271 TRIT1Q9H3H1 467 aaKnown RBP14.81□□□□□ -0.04
USB1-202ENST00000423271 KIR3DX1Q9H7L2 352 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 HRASLS2Q9NWW9 162 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 TTC7AQ9ULT0 858 aaPredicted RBP14.81□□□□□ -0.04
USB1-202ENST00000423271 ZNF148Q9UQR1 794 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 MRPS18BQ9Y676 258 aaKnown RBP14.81□□□□□ -0.04
USB1-202ENST00000423271 RPS6KL1Q9Y6S9 549 aa14.81□□□□□ -0.04
USB1-202ENST00000423271 KLHL33A6NCF5 533 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 OR51F1A6NGY5 319 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 PGRMC1O00264 195 aaKnown RBP14.8□□□□□ -0.04
USB1-202ENST00000423271 SPAG6O75602 509 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 EBLN1P0CF75 366 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 FOLR1P15328 257 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 OAS2P29728 719 aaKnown RBP14.8□□□□□ -0.04
USB1-202ENST00000423271 CDC20Q12834 499 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 TUBB3Q13509 450 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 IL11RAQ14626 422 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 DBN1Q16643 649 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 CCDC38Q502W7 563 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
USB1-202ENST00000423271 BORAQ6PGQ7 559 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 FBXO38Q6PIJ6 1188 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 C6orf15Q6UXA7 325 aaPredicted RBP14.8□□□□□ -0.04
USB1-202ENST00000423271 TAS2R42Q7RTR8 314 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 OOSP2Q86WS3 158 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 CLDN19Q8N6F1 224 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 PRELID2Q8N945 189 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 SIDT2Q8NBJ9 832 aaKnown RBP14.8□□□□□ -0.04
USB1-202ENST00000423271 OR52K1Q8NGK4 314 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 HEXDCQ8WVB3 486 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 CDKN2AIPNLQ96HQ2 116 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 PPM1MQ96MI6 270 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 NRTNQ99748 197 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 COG4Q9H9E3 785 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 STARD5Q9NSY2 213 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 LNPEPQ9UIQ6 1025 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 CROTQ9UKG9 612 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 ZKSCAN5Q9Y2L8 839 aa14.8□□□□□ -0.04
USB1-202ENST00000423271 CTAGE9A4FU28 777 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 OR6C74A6NCV1 312 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 TLCD2A6NGC4 264 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 MROH6A6NGR9 719 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 J3QKU1 62 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 CES2O00748 559 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 PSMD3O43242 534 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 SLC28A2O43868 658 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 IFNB1P01574 187 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 ETS1P14921 441 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 TCP1P17987 556 aaKnown RBP14.79□□□□□ -0.04
USB1-202ENST00000423271 PDHA2P29803 388 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 STIP1P31948 543 aaKnown RBP14.79□□□□□ -0.04
USB1-202ENST00000423271 GRIA1P42261 906 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 KCNJ1P48048 391 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 PREPP48147 710 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 KPNA2P52292 529 aaKnown RBP14.79□□□□□ -0.04
USB1-202ENST00000423271 CACNG1Q06432 222 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.79□□□□□ -0.04
USB1-202ENST00000423271 PAPD7Q5XG87 772 aaKnown RBP14.79□□□□□ -0.04
USB1-202ENST00000423271 DRICH1Q6PGQ1 229 aaPredicted RBP14.79□□□□□ -0.04
USB1-202ENST00000423271 PPP1R3BQ86XI6 285 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 STYXQ8WUJ0 223 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 STAMBPL1Q96FJ0 436 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 CCM2Q9BSQ5 444 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 EFHD1Q9BUP0 239 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 AP1M1Q9BXS5 423 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 OR52A5Q9H2C5 316 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 ETNK1Q9HBU6 452 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 PRSS21Q9Y6M0 314 aa14.79□□□□□ -0.04
USB1-202ENST00000423271 C17orf113A0A1B0GUU1 675 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 UBA6A0AVT1 1052 aaPredicted RBP14.78□□□□□ -0.04
USB1-202ENST00000423271 TERTO14746 1132 aaKnown RBP14.78□□□□□ -0.04
USB1-202ENST00000423271 POLR2CP19387 275 aaPredicted RBP14.78□□□□□ -0.04
USB1-202ENST00000423271 PSMA3P25788 255 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 FOXN2P32314 431 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 DLSTP36957 453 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 POLE2P56282 527 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 KRT33BQ14525 404 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 PWWP2BQ6NUJ5 590 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 C16orf46Q6P387 395 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 PRICKLE2Q7Z3G6 844 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 GLIS1Q8NBF1 620 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 OR4E2Q8NGC2 313 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 ACTRT1Q8TDG2 376 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 ZFPM2Q8WW38 1151 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 NAP1L3Q99457 506 aaPredicted RBP14.78□□□□□ -0.04
USB1-202ENST00000423271 CD180Q99467 661 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 PDE7BQ9NP56 450 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 GEMIN8Q9NWZ8 242 aaKnown RBP14.78□□□□□ -0.04
USB1-202ENST00000423271 SLC2A6Q9UGQ3 507 aa14.78□□□□□ -0.04
USB1-202ENST00000423271 RARRES3Q9UL19 164 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms