RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ATP5DP30049 168 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 MSH2P43246 934 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 POU4F1Q01851 419 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 HSPA14Q0VDF9 509 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 PROX2Q3B8N5 592 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 IYDQ6PHW0 289 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 PIP4P1Q86T03 277 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 PDZD3Q86UT5 571 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 C17orf82Q86X59 251 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-202ENST00000422991 VRK3Q8IV63 474 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SLC35F3Q8IY50 421 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SLC22A15Q8IZD6 547 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SFRP1Q8N474 314 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 ARL10Q8N8L6 244 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 GPR156Q8NFN8 814 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 BAHD1Q8TBE0 780 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-202ENST00000422991 SETD7Q8WTS6 366 aaKnown RBP16.63■□□□□ 0.25
COL7A1-202ENST00000422991 PATE1Q8WXA2 126 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 TRMT6Q9UJA5 497 aaKnown RBP16.63■□□□□ 0.25
COL7A1-202ENST00000422991 ZNF180Q9UJW8 692 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 PSMD13Q9UNM6 376 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 IKBKGQ9Y6K9 419 aa16.63■□□□□ 0.25
COL7A1-202ENST00000422991 LY6G6EA0A0G2JKS1 128 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 KIR2DS5A0A0G2JLQ3 304 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 A0A0G2JNG1 304 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 HMX2A2RU54 273 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 OR5K4A6NMS3 321 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 KIR2DS3K7RE56 304 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 CBFA2T3O75081 653 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 NUDT17P0C025 328 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SKIV2L2P42285 1042 aaKnown RBP16.62■□□□□ 0.25
COL7A1-202ENST00000422991 HALP42357 657 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SERPINB9P50453 376 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 TAS2R39P59534 338 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 BMPR2Q13873 1038 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 KIR2DS5Q14953 304 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 CLCA4Q14CN2 919 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 TTLL9Q3SXZ7 439 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 C14orf28Q4W4Y0 310 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 CAPRIN2Q6IMN6 1127 aaKnown RBP16.62■□□□□ 0.25
COL7A1-202ENST00000422991 UGT3A1Q6NUS8 523 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SPNS2Q8IVW8 549 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SPDYE1Q8NFV5 336 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-202ENST00000422991 RHBDD1Q8TEB9 315 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SLC37A2Q8TED4 501 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 INPP5DQ92835 1189 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 APOLD1Q96LR9 279 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 CAMK1GQ96NX5 476 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 CCDC77Q9BR77 488 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SLC24A2Q9UI40 661 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 SLC39A10Q9ULF5 831 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 U3KQA8 63 aa16.62■□□□□ 0.25
COL7A1-202ENST00000422991 OR52A4PA6NMU1 304 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 SAT1P21673 171 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 ACADLP28330 430 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 PGGT1BP53609 377 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 MAZP56270 477 aaKnown RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 UBE2IP63279 158 aaKnown RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 PDAP1Q13442 181 aaKnown RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 USP10Q14694 798 aaKnown RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 ZKSCAN8Q15776 578 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 RPE65Q16518 533 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 ACSBG2Q5FVE4 666 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 TAOK1Q7L7X3 1001 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 CEP97Q8IW35 865 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 MAPK15Q8TD08 544 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 HNRNPLLQ8WVV9 542 aaKnown RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 TSPAN17Q96FV3 270 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 INSM2Q96T92 566 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 CAB39LQ9H9S4 337 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 PPCSQ9HAB8 311 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 POPDC3Q9HBV1 291 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 NCKIPSDQ9NZQ3 722 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 ZNF624Q9P2J8 865 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 PSMC3IPQ9P2W1 217 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-202ENST00000422991 FTSJ1Q9UET6 329 aa16.61■□□□□ 0.25
COL7A1-202ENST00000422991 EIF3FO00303 357 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 IFRD1O00458 451 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 TM4SF5O14894 197 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 TCEA3O75764 348 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 KRT38O76015 456 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 WISP3O95389 354 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CBSLP0DN79 551 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 MTHFD1P11586 935 aaKnown RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 XRCC1P18887 633 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CNTFP26441 200 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CBSP35520 551 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 ZNF460Q14592 562 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 NR0B2Q15466 257 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 BEND6Q5SZJ8 279 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 MROH9Q5TGP6 573 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 ADGRD1Q6QNK2 874 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 PAQR3Q6TCH7 311 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CPNE9Q8IYJ1 553 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 ARL14Q8N4G2 192 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 OR2W6PQ8NHA6 318 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CNDP2Q96KP4 475 aaKnown RBP16.6■□□□□ 0.25
COL7A1-202ENST00000422991 C12orf66Q96MD2 445 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CPNE7Q9UBL6 633 aa16.6■□□□□ 0.25
COL7A1-202ENST00000422991 CFAP20Q9Y6A4 193 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms