RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 COG4Q9H9E3 785 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 POLR1BQ9H9Y6 1135 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 POT1Q9NUX5 634 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 NINJ2Q9NZG7 142 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 IL1RAPL1Q9NZN1 696 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 TMEM9Q9P0T7 183 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 MARCH4Q9P2E8 410 aaPredicted RBP9.47□□□□□ -0.89
HERC3-204ENST00000422770 ZNF624Q9P2J8 865 aaPredicted RBP9.47□□□□□ -0.89
HERC3-204ENST00000422770 TSR3Q9UJK0 312 aaKnown RBP9.47□□□□□ -0.89
HERC3-204ENST00000422770 SOX13Q9UN79 622 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 LOXL2Q9Y4K0 774 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 PRSS21Q9Y6M0 314 aa9.47□□□□□ -0.89
HERC3-204ENST00000422770 IGLV3-16A0A075B6K0 115 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 IGHV5-10-1A0A0J9YXX1 117 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 KLHL33A6NCF5 533 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 SDR42E2A6NKP2 422 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 AGAP14A8MT82 685 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 DYNC1I1O14576 645 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 PLD2O14939 933 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 PFDN6O15212 129 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 EIF3HO15372 352 aaKnown RBP eCLIP9.46□□□□□ -0.9
HERC3-204ENST00000422770 RASSF9O75901 435 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 KRT37O76014 449 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 UBXN7O94888 489 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 AP2A2O94973 939 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 ACSL3O95573 720 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 MTHFD1P11586 935 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 MLNP12872 115 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 BRAFP15056 766 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 CSF2RBP32927 897 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 CSTF2P33240 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
HERC3-204ENST00000422770 ELK3P41970 407 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 MAGEA3P43357 314 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 TTPAP49638 278 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 PMS2P54278 862 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 EPHA4P54764 986 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 UBE2IP63279 158 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 THOC5Q13769 683 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 NR1D2Q14995 579 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 SLMAPQ14BN4 828 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 RTP5Q14D33 572 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 UBAP2Q5T6F2 1119 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 AGAP9Q5VTM2 703 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 METRNLQ641Q3 311 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 MRNIPQ6NTE8 343 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 ARMC6Q6NXE6 501 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 IRGCQ6NXR0 463 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 ABRAXAS1Q6UWZ7 409 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 WASH2PQ6VEQ5 465 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 CERS6Q6ZMG9 384 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 SDCCAG8Q86SQ7 713 aaPredicted RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 CACTIN-AS1Q8N1I8 211 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 UHMK1Q8TAS1 419 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 GSDMBQ8TAX9 411 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 SKA2Q8WVK7 121 aaPredicted RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.46□□□□□ -0.9
HERC3-204ENST00000422770 TMEM159Q96B96 161 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 GRAMD1AQ96CP6 724 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 LIN37Q96GY3 246 aaPredicted RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 RMDN2Q96LZ7 410 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 TGM7Q96PF1 710 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 FERD3LQ96RJ6 166 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 CMKLR1Q99788 373 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 KIFC1Q9BW19 673 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 MRM3Q9HC36 420 aaKnown RBP9.46□□□□□ -0.9
HERC3-204ENST00000422770 WASH6PQ9NQA3 447 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 TREX1Q9NSU2 369 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 ACSL5Q9ULC5 683 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 RIMKLBQ9ULI2 386 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 RPS6KL1Q9Y6S9 549 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 CEP295Q9C0D2 2601 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 USP24Q9UPU5 2620 aa9.46□□□□□ -0.9
HERC3-204ENST00000422770 LILRA5A6NI73 299 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 E7ESA3 106 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 SGTAO43765 313 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 HOXB3P14651 431 aaPredicted RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 PGAM1P18669 254 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 ITIH1P19827 911 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 CCKBRP32239 447 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 MAGEA4P43358 317 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 ARCN1P48444 511 aaKnown RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 LSSP48449 732 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 GFERP55789 205 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 ACVR1Q04771 509 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 EIF3IQ13347 325 aaKnown RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 C16orf72Q14CZ0 275 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 TMED2Q15363 201 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 ZNF470Q6ECI4 717 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 TMEM71Q6P5X7 295 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 PACS1Q6VY07 963 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 LRRC69Q6ZNQ3 347 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 PROSER1Q86XN7 944 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 PLXDC1Q8IUK5 500 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 RBM12BQ8IXT5 1001 aaKnown RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 LSMEM2Q8N112 164 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms