RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 IL7RP16871 459 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 RANBP1P43487 201 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 RGS4P49798 205 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 NFATC2Q13469 925 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 TRIM74Q86UV6 250 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 KLHDC8BQ8IXV7 354 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 ADGRG5Q8IZF4 528 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 DTWD1Q8N5C7 304 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 POLR1BQ9H9Y6 1135 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
MCF2L-213ENST00000421756 SLC6A13Q9NSD5 602 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 OLAHQ9NV23 265 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 AIG1Q9NVV5 245 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 DUS2Q9NX74 493 aaKnown RBP13.11□□□□□ -0.31
MCF2L-213ENST00000421756 WARS2Q9UGM6 360 aaKnown RBP13.11□□□□□ -0.31
MCF2L-213ENST00000421756 OR7A17O14581 309 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 H6PDO95479 791 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 F11P03951 625 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 RPIAP49247 311 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 CLCN7P51798 805 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 LSM3P62310 102 aaKnown RBP13.11□□□□□ -0.31
MCF2L-213ENST00000421756 ERVK-8P63133 956 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 RETSATQ6NUM9 610 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 GPR156Q8NFN8 814 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 SPATA17Q96L03 361 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 OR52E6Q96RD3 313 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 FAM126AQ9BYI3 521 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-213ENST00000421756 PARVBQ9HBI1 364 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
MCF2L-213ENST00000421756 SLC22A14Q9Y267 594 aa13.11□□□□□ -0.31
MCF2L-213ENST00000421756 NINQ8N4C6 2090 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 SCN4AP35499 1836 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 AGRPO00253 132 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ZDHHC11BP0C7U3 371 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TACR1P25103 407 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 SLC5A2P31639 672 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 PTGER3P43115 390 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 DGKEP52429 567 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 NTHL1P78549 312 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 XIAPP98170 497 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 CACNG1Q06432 222 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 MERTKQ12866 999 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 IRF5Q13568 498 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ADNP2Q6IQ32 1131 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 SBSNQ6UWP8 590 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 GAREM2Q75VX8 874 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TMEM25Q86YD3 366 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 VRK3Q8IV63 474 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 RGL4Q8IZJ4 473 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 MRPS31Q92665 395 aaKnown RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 HOPXQ9BPY8 73 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TMEM39AQ9NV64 488 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 INVSQ9Y283 1065 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 SLC22A2O15244 555 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 MAGEB3O15480 346 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 WDR47O94967 919 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 C8BP07358 591 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TFPTP0C1Z6 253 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 CSF2RAP15509 400 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 LAMB3Q13751 1172 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 RBM23Q86U06 439 aaKnown RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 DHRSXQ8N5I4 330 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TRIM15Q9C019 465 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 IL37Q9NZH6 218 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ADGRE2Q9UHX3 823 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 PLK4O00444 970 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 SCAMP1O15126 338 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 WISP3O95389 354 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 FGF4P08620 206 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ACVR1Q04771 509 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 VAC14Q08AM6 782 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TMEM199Q8N511 208 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 BPIFB6Q8NFQ5 453 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 GPR150Q8NGU9 434 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ROPN1LQ96C74 230 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TCEAL4Q96EI5 215 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 MUS81Q96NY9 551 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 ELOVL6Q9H5J4 265 aa13.1□□□□□ -0.31
MCF2L-213ENST00000421756 CCM2LQ9NUG4 571 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-213ENST00000421756 TAPBPO15533 448 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PGLSO95336 258 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 LRG1P02750 347 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ESR1P03372 595 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 TCF3P15923 654 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PREPP48147 710 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ACADVLP49748 655 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CYP27C1Q4G0S4 372 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms