RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SMAD5Q99717 465 aaKnown RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 MAT2BQ9NZL9 334 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF180Q9UJW8 692 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 A0A0U1RQJ8 604 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 HAS3O00219 553 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 CCL22O00626 93 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 VEGFDO43915 354 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 TPP2P29144 1249 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 CXCL12P48061 93 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 SLC25A11Q02978 314 aaKnown RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 GALNT2Q10471 571 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 SLC9A5Q14940 896 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 ZYG11AQ6WRX3 759 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 SLC9A6Q92581 669 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 RGSL1A5PLK6 1076 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 TTC34A8MYJ7 566 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 FCHO1O14526 889 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 SCN2BO60939 215 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 PIAS1O75925 651 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 TGDSO95455 350 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 PTPN4P29074 926 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 RBMS1P29558 406 aaKnown RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 SLC1A2P43004 574 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 PKNOX1P55347 436 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 CDC73Q6P1J9 531 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 BEND5Q7L4P6 421 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 ANKRD33Q7Z3H0 272 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 DLG3Q92796 817 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 FGF13Q92913 245 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 ZBED6CLQ96FA7 236 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 OR2M4Q96R27 311 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 FNDC11Q9BVV2 318 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 MRM3Q9HC36 420 aaKnown RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 TRPS1Q9UHF7 1281 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 PLLPQ9Y342 182 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 ANKRD65E5RJM6 399 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 APOA1P02647 267 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 FEN1P39748 380 aaKnown RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 OC90Q02509 493 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-206ENST00000421141 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 LRRC57Q8N9N7 239 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 COPG2Q9UBF2 871 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 PRKAB1Q9Y478 270 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 F5P12259 2224 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 KIAA0355O15063 1070 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 MID1O15344 667 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 EPOP01588 193 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 JUNDP17535 347 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 OR4E2Q8NGC2 313 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 WDR92Q96MX6 357 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 HSFX1Q9UBD0 423 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 SEC14L3Q9UDX4 400 aa10.57□□□□□ -0.72
PTCH1-206ENST00000421141 FKBP6O75344 327 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 CER1O95813 267 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 ANXA4P09525 319 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 IL1R2P27930 398 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 PRSS58Q8IYP2 241 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 OR2T3Q8NH03 318 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 RMND5BQ96G75 393 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 KLHL4Q9C0H6 718 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SLITRK2Q9H156 845 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 KLHL33A6NCF5 533 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 FAM170BA6NMN3 283 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 CPN2P22792 545 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 LCP2Q13094 533 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SEMA3AQ14563 771 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 FAM26DQ5JW98 314 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 TMEM145Q8NBT3 493 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 TMEM98Q9Y2Y6 226 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 LYVE1Q9Y5Y7 322 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 NUDT17P0C025 328 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SERPINB3P29508 390 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 KIR3DL1P43629 444 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 AP1S2P56377 157 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 ZBTB49Q6ZSB9 765 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 DNAJB14Q8TBM8 379 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 CDKN2AIPNLQ96HQ2 116 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 USP29Q9HBJ7 922 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 PDE7BQ9NP56 450 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SSC5DA1L4H1 1573 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 DYTNA2CJ06 578 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A9O60656 530 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 H2AFXP16104 143 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A6P19224 532 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A1P22309 533 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A4P22310 534 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A3P35503 534 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A5P35504 534 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 PLA2G16P53816 162 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 PLGLB1Q02325 96 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 DCUN1D3Q8IWE4 304 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 DENND6AQ8IWF6 608 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 TRPV1Q8NER1 839 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 MOSPD2Q8NHP6 518 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 HM13Q8TCT9 377 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 AGAP2Q99490 1192 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms