RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BTN3A1O00481 513 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 RRP9O43818 475 aaKnown RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 NDUFS2O75306 463 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 PSIP1O75475 530 aaKnown RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 TGDSO95455 350 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 IMPDH1P20839 514 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 GLRBP48167 497 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 AP1S2P56377 157 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 GABPB1Q06547 395 aaPredicted RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 HSPA14Q0VDF9 509 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 PTK2BQ14289 1009 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 TGFBIQ15582 683 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 TSNQ15631 228 aaKnown RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 ZNF648Q5T619 568 aaPredicted RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 WASH2PQ6VEQ5 465 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 TRIM74Q86UV6 250 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 C10orf107Q8IVU9 208 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 KIRREL3Q8IZU9 778 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 SPATA6LQ8N4H0 392 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 BEND7Q8N7W2 519 aaPredicted RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 MFSD2AQ8NA29 543 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 CCDC63Q8NA47 563 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 C1orf216Q8TAB5 229 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 KLK6Q92876 244 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 SCYL1Q96KG9 808 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 WDR92Q96MX6 357 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 PAIP2Q9BPZ3 127 aaKnown RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 TRMOQ9BU70 441 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 MLXIPLQ9NP71 852 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 SARS2Q9NP81 518 aaKnown RBP13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 WASH6PQ9NQA3 447 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 THAP1Q9NVV9 213 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 NUDT4Q9NZJ9 180 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 HAO1Q9UJM8 370 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 A8MT66 165 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 CDC7O00311 574 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 NPHS1O60500 1241 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 SMIM24O75264 130 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 FSBPO95073 299 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 FAM107AO95990 144 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 FUCA1P04066 466 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 VCLP18206 1134 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 KCNA4P22459 653 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 ACADLP28330 430 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 GGT5P36269 586 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 ALDH18A1P54886 795 aaKnown RBP13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 HERVK_113P63132 956 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 RACK1P63244 317 aaKnown RBP13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 CBX1P83916 185 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 OCRLQ01968 901 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 CSTF1Q05048 431 aaKnown RBP13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 UNC5DQ6UXZ4 953 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 LONP2Q86WA8 852 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 GPSM1Q86YR5 675 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 TCAIMQ8N3R3 496 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 FAM136AQ96C01 138 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 CNDP1Q96KN2 507 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 ERVK-6Q9BXR3 956 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 TPSD1Q9BZJ3 242 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 DRC3Q9H069 523 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 OR52A5Q9H2C5 316 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 PARVBQ9HBI1 364 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 TRNAU1APQ9NX07 287 aaKnown RBP13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 ZSCAN32Q9NX65 697 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 NCKIPSDQ9NZQ3 722 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 CPSF2Q9P2I0 782 aaKnown RBP13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 IKZF3Q9UKT9 509 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 PCOLCE2Q9UKZ9 415 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 RNF112Q9ULX5 631 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 TMEM98Q9Y2Y6 226 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 TNPO3Q9Y5L0 923 aaKnown RBP13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 R4GN57 208 aa13.96□□□□□ -0.17
SHMT1P1-201ENST00000419974 SPTY2D1-AS1A0A0U1RR47 76 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 A0A1W2PR77 199 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 PRSS38A1L453 326 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 EDF1O60869 148 aaKnown RBP13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 ITGB6P18564 788 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 CNR2P34972 360 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 HNMTP50135 292 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 HK2P52789 917 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 CTBSQ01459 385 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 STX3Q13277 289 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 SYTL3Q4VX76 610 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 SULT1C3Q6IMI6 304 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 Q6ZSR6 202 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 TAX1BP1Q86VP1 789 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 GALNT13Q8IUC8 556 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 VRK3Q8IV63 474 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 KLHDC8AQ8IYD2 350 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 CHCHD4Q8N4Q1 142 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 UBTD2Q8WUN7 234 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 RLN3Q8WXF3 142 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 MECRQ9BV79 373 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 FZD3Q9NPG1 666 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 PTBP2Q9UKA9 531 aaKnown RBP13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 SUFUQ9UMX1 484 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 GVINP1Q7Z2Y8 2422 aa13.95□□□□□ -0.18
SHMT1P1-201ENST00000419974 WDR87Q6ZQQ6 2873 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms