RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ELOVL7A1L3X0 281 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 HSF2Q03933 536 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 PUM1Q14671 1186 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 UTS2BQ765I0 119 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GPN1Q9HCN4 374 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 MATN3O15232 486 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 MMP8P22894 467 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CRHR1P34998 444 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 SLC6A9P48067 706 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GALK1P51570 392 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 LRRC32Q14392 662 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 EOGTQ5NDL2 527 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CEP295NLQ96MC4 621 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 TCF12Q99081 682 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CHID1Q9BWS9 393 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GPR88Q9GZN0 384 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 SERINC1Q9NRX5 453 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CALML5Q9NZT1 146 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 ARL5AQ9Y689 179 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 NEMP2A6NFY4 417 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CA12O43570 354 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 AP2A2O94973 939 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 PGM3O95394 542 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 ANPEPP15144 967 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 PBX3P40426 434 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 NCBP2P52298 156 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 THAP5Q7Z6K1 395 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 SPPL2CQ8IUH8 684 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 ZBED6CLQ96FA7 236 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 HBEGFQ99075 208 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 RBM4BQ9BQ04 359 aaKnown RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 RBM4Q9BWF3 364 aaKnown RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GSDMCQ9BYG8 508 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 C11orf16Q9NQ32 467 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 BTNL10A8MVZ5 291 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GPR25O00155 361 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 KCTD19Q17RG1 926 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 FAM92BQ6ZTR7 304 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 SLC22A18Q96BI1 424 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 OR51V1Q9H2C8 321 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 FANCFQ9NPI8 374 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 FBXL12Q9NXK8 326 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 WASHC1A8K0Z3 465 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 WASH3PC4AMC7 463 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 IFNW1P05000 195 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CCNFP41002 786 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 EIPR1Q53HC9 387 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 ALG1LQ6GMV1 187 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GLYATQ6IB77 296 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 WASH2PQ6VEQ5 465 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 LBX2Q6XYB7 198 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 OR6K6Q8NGW6 343 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 BRSK1Q8TDC3 778 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 PIK3R3Q92569 461 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 RTKNQ9BST9 563 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 TBC1D10AQ9BXI6 508 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CCL22O00626 93 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 TULP3O75386 442 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 NME6O75414 186 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 IL33O95760 270 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 ASLP04424 464 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 C2P06681 752 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 TAF1AQ15573 450 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 MLIPQ5VWP3 458 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 GPR65Q8IYL9 337 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 AUTS2Q8WXX7 1259 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 TMEM125Q96AQ2 219 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 FAM84AQ96KN4 292 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 PRPF19Q9UMS4 504 aaKnown RBP11.06□□□□□ -0.64
PTCH1-205ENST00000418258 CDC14AQ9UNH5 594 aa11.06□□□□□ -0.64
PTCH1-205ENST00000418258 RENP00797 406 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 TPSB2P20231 275 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 ACVR2AP27037 513 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 ACTR1BP42025 376 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 YAP1P46937 504 aaKnown RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 ACTR1AP61163 376 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 GBE1Q04446 702 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 TPSAB1Q15661 275 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 RAB30Q15771 203 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 GDPD4Q6W3E5 623 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SYVN1Q86TM6 617 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 OR10H4Q8NGA5 316 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 GTPBP3Q969Y2 492 aaKnown RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 GDAP2Q9NXN4 497 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 WNT9AO14904 365 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 GNAZP19086 355 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 IL10RBQ08334 325 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 ARMC10Q8N2F6 343 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SLC38A4Q969I6 547 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SLC25A36Q96CQ1 311 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CCNB1IP1Q9NPC3 277 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 TBC1D24Q9ULP9 559 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 BCKDKO14874 412 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms