RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 DEFB132Q7Z7B7 95 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 CCDC190Q86UF4 302 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 HIPK1Q86Z02 1210 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 KBTBD8Q8NFY9 601 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 FCGR1BQ92637 280 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 RHBDF1Q96CC6 855 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF583Q96ND8 569 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 NEDD4LQ96PU5 975 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 POLR3BQ9NW08 1133 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 ZIM2Q9NZV7 527 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 CDH9Q9ULB4 789 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SYNJ2BP-COX16A0A087WUM0 186 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 A0A0U1RQS6 177 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 MEIOCA2RUB1 952 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 CTDSP2O14595 271 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM20BO75063 409 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 UGT2B17O75795 530 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 PFKLP17858 780 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 IGFBP5P24593 272 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SCNN1GP51170 649 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 UGT2B15P54855 530 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 DGKZQ13574 1117 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM132DQ14C87 1099 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SMN1Q16637 294 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 CCNJQ5T5M9 372 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 GPR158Q5T848 1215 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 DPP9Q86TI2 863 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 TP53I13Q8NBR0 393 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SEPT1Q8WYJ6 367 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC7A6Q92536 515 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 NT5C3BQ969T7 300 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 PTERQ96BW5 349 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 APOL4Q9BPW4 351 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 NARFLQ9H6Q4 476 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 WDR6Q9NNW5 1121 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM45AQ9NWC5 275 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 C14orf119Q9NWQ9 140 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 COX16Q9P0S2 106 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 LIMD1Q9UGP4 676 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 AAR2Q9Y312 384 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 LRRC14BA6NHZ5 514 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 MITFO75030 526 aaPredicted RBP7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF780AO75290 641 aaPredicted RBP7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 SERPINF2P08697 491 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 EFNA1P20827 205 aaPredicted RBP7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 RPS5P46782 204 aaKnown RBP7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 SEMA3BQ13214 749 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 SLAMF1Q13291 335 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 GPAT3Q53EU6 434 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 ZFAND4Q86XD8 727 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 LRRC71Q8N4P6 559 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 APPL2Q8NEU8 664 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 SPATA22Q8NHS9 363 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 GIPC2Q8TF65 315 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 IPCEF1Q8WWN9 437 aaPredicted RBP7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 ELMO1Q92556 727 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 SNAPC3Q92966 411 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC39A13Q96H72 371 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 NPY6RQ99463 290 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 RANGRFQ9HD47 186 aaPredicted RBP7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 TRAPPC4Q9Y296 219 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 PKP3Q9Y446 797 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 PCDHGB2Q9Y5G2 931 aa7.9□□□□□ -1.15
HMGXB4-202ENST00000418170 RFX2P48378 723 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 BNC1Q01954 994 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PRKG2Q13237 762 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 SIM2Q14190 667 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC10A6Q3KNW5 377 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 RAB44Q7Z6P3 723 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 CHPFQ8IZ52 775 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 CACTIN-AS1Q8N1I8 211 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PROKR1Q8TCW9 393 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 GTF2H4Q92759 462 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 EXT2Q93063 718 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 FYTTD1Q96QD9 318 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 LPIN3Q9BQK8 851 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ENTPD7Q9NQZ7 604 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 M0QYT0 321 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 M0R082 166 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PDHXO00330 501 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 DDX5P17844 614 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 KRT20P35900 424 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ETV3P41162 512 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 STAT5BP51692 787 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 TPI1P60174 286 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 MAD2L1BPQ15013 274 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ESCO2Q56NI9 601 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PRSS36Q5K4E3 855 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 GALNT5Q7Z7M9 940 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 CYP4Z1Q86W10 505 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 OR2T12Q8NG77 320 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 OR8J3Q8NGG0 315 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 OR52E4Q8NGH9 312 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ZFAND1Q8TCF1 268 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms