RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 MFSD3Q96ES6 412 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 TMEM74Q96NL1 305 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 TCF12Q99081 682 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 SLC38A3Q99624 504 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 SLC40A1Q9NP59 571 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 CATSPERZQ9NTU4 200 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 SAMD15Q9P1V8 674 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 WDR37Q9Y2I8 494 aa12.96□□□□□ -0.33
TGFBR3-203ENST00000417833 APC2O95996 2303 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 TP73O15350 636 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 VAPBO95292 243 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 VIPP01282 170 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 PAMP19021 973 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 ARCN1P48444 511 aaKnown RBP12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 SEMA3AQ14563 771 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 COL28A1Q2UY09 1125 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 CAPRIN2Q6IMN6 1127 aaKnown RBP12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 IGF2-ASQ6U949 168 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 MICALCLQ6ZW33 695 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 CCDC25Q86WR0 208 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 CFAP206Q8IYR0 622 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 IQCKQ8N0W5 287 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 BBC3Q96PG8 261 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 KCNK4Q9NYG8 393 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 MARCH4Q9P2E8 410 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 PDP2Q9P2J9 529 aa12.95□□□□□ -0.34
TGFBR3-203ENST00000417833 KALRNO60229 2985 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 GOLGA8MH3BSY2 632 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 LIN7AO14910 233 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 USP1O94782 785 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 FTH1P02794 183 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 LSSP48449 732 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 CD151P48509 253 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 INHBCP55103 352 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 ADARP55265 1226 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 PLOD1Q02809 727 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 EIF3IQ13347 325 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 SEPT7Q16181 437 aaKnown RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 RPE65Q16518 533 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 HIF1AQ16665 826 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 TYSND1Q2T9J0 566 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 MRNIPQ6NTE8 343 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 CASC4Q6P4E1 433 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 ZNF449Q6P9G9 518 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 WDR74Q6RFH5 385 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 TMEM26Q6ZUK4 368 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 LRRC6Q86X45 466 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 SLITRK4Q8IW52 837 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 TRIM48Q8IWZ4 208 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 PDIK1LQ8N165 341 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 AGGF1Q8N302 714 aaeCLIP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 OR4D9Q8NGE8 314 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 TMEM159Q96B96 161 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 CXorf40BQ96DE9 158 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 NXPE2Q96DL1 559 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 FCRL3Q96P31 734 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 NAT9Q9BTE0 207 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 COG4Q9H9E3 785 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 PCDHGA8Q9Y5G5 932 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 PRSS21Q9Y6M0 314 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 FAM169AQ9Y6X4 670 aa12.94□□□□□ -0.34
TGFBR3-203ENST00000417833 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 GOLGA6L10A6NI86 522 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 OR52A4PA6NMU1 304 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 PRMT5O14744 637 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 PFDN6O15212 129 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 OR1I1O60431 355 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 POLBP06746 335 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 NUDT17P0C025 328 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 SLC35G4P0C7Q5 338 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 MTHFD1P11586 935 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 RPS3P23396 243 aaKnown RBP eCLIP12.93□□□□□ -0.342e-9■■□□□ 14
TGFBR3-203ENST00000417833 PBLDP30039 288 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 LIMK2P53671 638 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 CFHR1Q03591 330 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 TRA2AQ13595 282 aaKnown RBP eCLIP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 UAP1Q16222 522 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 RNF187Q5TA31 235 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 NEPROQ6NW34 567 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 TMEM71Q6P5X7 295 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 CES3Q6UWW8 571 aa12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-203ENST00000417833 USP53Q70EK8 1073 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms