RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CD1CP29017 333 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 PDHA2P29803 388 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 CCR7P32248 378 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 PREPP48147 710 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 CARSP49589 748 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 XKR5Q6UX68 686 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 OTOAQ7RTW8 1153 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 ZNF761Q86XN6 746 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 UNC5BQ8IZJ1 945 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 C2CD4AQ8NCU7 369 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 SPDYE1Q8NFV5 336 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 GSDMBQ8TAX9 411 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 TMEM74Q96NL1 305 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 WDR83Q9BRX9 315 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 TSPYL1Q9H0U9 437 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 FBXO6Q9NRD1 293 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 MTRF1LQ9UGC7 380 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 FAM149AA5PLN7 773 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 ESPNB1AK53 854 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 E5RI56 91 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 DUX1O43812 170 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 AOAHP28039 575 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 LEPRP48357 1165 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 CLDN6P56747 220 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 HSPA14Q0VDF9 509 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 FASTKD3Q14CZ7 662 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 MAP9Q49MG5 647 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 CTSL3PQ5NE16 218 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 USP53Q70EK8 1073 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 PDZD3Q86UT5 571 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 CCDC25Q86WR0 208 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 CNTN4Q8IWV2 1026 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 KRT222Q8N1A0 295 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 RMDN2Q96LZ7 410 aa22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 DMGDHQ9UI17 866 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 CFAP20Q9Y6A4 193 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-205ENST00000417137 CHD8Q9HCK8 2581 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 D6RAR5 112 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 CSO75390 466 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 GSTA2P09210 222 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 MGAT5Q09328 741 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 GPR18Q14330 331 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 ISXQ2M1V0 245 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 TEDDM1Q5T9Z0 273 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 IFT81Q8WYA0 676 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 TFGQ92734 400 aaPredicted RBP22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 FERD3LQ96RJ6 166 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 ZMYND15Q9H091 742 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 MVB12BQ9H7P6 319 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 L2HGDHQ9H9P8 463 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 PLAC1Q9HBJ0 212 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 MOCS1Q9NZB8 636 aa22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 ATXN7L1Q9ULK2 861 aaPredicted RBP22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 ZFC3H1O60293 1989 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-205ENST00000417137 BHMG1C9JSJ3 638 aaPredicted RBP22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 GPC4O75487 556 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 HAUS5O94927 633 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 AMD1P17707 334 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 MAGEA4P43358 317 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 MAPK9P45984 424 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 CSE1LP55060 971 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 ZNF789Q5FWF6 425 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 PLEKHS1Q5SXH7 462 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 NKAIN2Q5VXU1 208 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 KLHL35Q6PF15 583 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 NAPRTQ6XQN6 538 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 GALNT7Q86SF2 657 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 LKAAEAR1Q8TD35 194 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 TBC1D10AQ9BXI6 508 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 STRADBQ9C0K7 418 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 LATS2Q9NRM7 1088 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 ZDHHC18Q9NUE0 388 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 ZFATQ9P243 1243 aa22.54■■□□□ 1.2
SMARCB1-205ENST00000417137 BPTFQ12830 3046 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 ASXL3Q9C0F0 2248 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 UBXN7O94888 489 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 SLCO2B1O94956 709 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 INHBCP55103 352 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 MPP1Q00013 466 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 PLCL1Q15111 1095 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 TMEM71Q6P5X7 295 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 TRMT10BQ6PF06 316 aaKnown RBP22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 WDR74Q6RFH5 385 aaPredicted RBP22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 C3orf62Q6ZUJ4 267 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 CYS1Q717R9 158 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 IFT20Q8IY31 132 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 SLC22A15Q8IZD6 547 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 OR4D9Q8NGE8 314 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 NCSTNQ92542 709 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 KIR3DX1Q9H7L2 352 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 RDH14Q9HBH5 336 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 NSMCE4AQ9NXX6 385 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 KLHL42Q9P2K6 505 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 ASF1AQ9Y294 204 aa22.53■■□□□ 1.2
SMARCB1-205ENST00000417137 PRAMEF33A0A0G2JMD5 474 aa22.52■■□□□ 1.2
SMARCB1-205ENST00000417137 CASC3O15234 703 aaKnown RBP22.52■■□□□ 1.2
SMARCB1-205ENST00000417137 NIPSNAP2O75323 286 aa22.52■■□□□ 1.2
SMARCB1-205ENST00000417137 AHSGP02765 367 aa22.52■■□□□ 1.2
SMARCB1-205ENST00000417137 PROS1P07225 676 aa22.52■■□□□ 1.2
SMARCB1-205ENST00000417137 ACADLP28330 430 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms