RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CACNA2D1P54289 1103 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 DNAJB13P59910 316 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 PIGWQ7Z7B1 504 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 NRSN1Q8IZ57 195 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 OR2T34Q8NGX1 318 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 OR10T2Q8NGX3 314 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 OR2T3Q8NH03 318 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 KIAA1191Q96A73 305 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 RTP4Q96DX8 246 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SLC38A3Q99624 504 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 OR2AG1Q9H205 316 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SNX7Q9UNH6 387 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 GTPBP1O00178 669 aaKnown RBP11.78□□□□□ -0.52
PTPRF-205ENST00000414879 RPS14P62263 151 aaKnown RBP11.78□□□□□ -0.52
PTPRF-205ENST00000414879 FOXM1Q08050 763 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 ZNF805Q5CZA5 627 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 LY6G5CQ5SRR4 150 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 CYP4X1Q8N118 509 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 OR13C4Q8NGS5 318 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SMARCD2Q92925 531 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 TSSK3Q96PN8 268 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 RIOK2Q9BVS4 552 aaKnown RBP11.78□□□□□ -0.52
PTPRF-205ENST00000414879 ZIM2Q9NZV7 527 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 NDRG2Q9UN36 371 aaKnown RBP11.78□□□□□ -0.52
PTPRF-205ENST00000414879 MYADML2A6NDP7 307 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 NEMP2A6NFY4 417 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 DUXAA6NLW8 204 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SLC25A12O75746 678 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 CHRNA4P43681 627 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SEMA3AQ14563 771 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 PPP4R4Q6NUP7 873 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 CILP2Q8IUL8 1156 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 GPR65Q8IYL9 337 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 DDHD1Q8NEL9 900 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 C12orf66Q96MD2 445 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 DDX18Q9NVP1 670 aaKnown RBP11.78□□□□□ -0.52
PTPRF-205ENST00000414879 PCDHGA2Q9Y5H1 932 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 KAT6AQ92794 2004 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 LILRB3O75022 631 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 UGT2B11O75310 529 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 SH3BGRLO75368 114 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 IFNGP01579 166 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 CCDC85BQ15834 202 aaPredicted RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 SCIMPQ6UWF3 145 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 MRPS30Q9NP92 439 aaKnown RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 PNPLA3Q9NST1 481 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 SAMHD1Q9Y3Z3 626 aaKnown RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 B3GALT2O43825 422 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 OR4F21O95013 312 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 CLCN4P51793 760 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 TRAP1Q12931 704 aaKnown RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 CHRNA6Q15825 494 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 ARMCX4Q5H9R4 360 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 BROXQ5VW32 411 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 LDB1Q86U70 411 aaPredicted RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 NUDT13Q86X67 352 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 SLC43A3Q8NBI5 491 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 WDR60Q8WVS4 1066 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 SLC47A1Q96FL8 570 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 MYOCQ99972 504 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 FEM1AQ9BSK4 669 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 ACAT2Q9BWD1 397 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 ATG10Q9H0Y0 220 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 WDR55Q9H6Y2 383 aaPredicted RBP11.77□□□□□ -0.52
PTPRF-205ENST00000414879 ELOVL2Q9NXB9 296 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 SCML1Q9UN30 329 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 GMPPBQ9Y5P6 360 aa11.77□□□□□ -0.52
PTPRF-205ENST00000414879 NPPAP01160 153 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 FYNP06241 537 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 MPC1LP0DKB6 136 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 GRIA2P42262 883 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 CCR4P51679 360 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 WDR45BQ5MNZ6 344 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 MPP7Q5T2T1 576 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 NAIF1Q69YI7 327 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-205ENST00000414879 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.77□□□□□ -0.531e-11■■□□□ 13.6
PTPRF-205ENST00000414879 PQLC1Q8N2U9 271 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 TSPEARQ8WU66 669 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 PYDC1Q8WXC3 89 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 EIF2B4Q9UI10 523 aaKnown RBP11.77□□□□□ -0.53
PTPRF-205ENST00000414879 CD84Q9UIB8 345 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 ABLIM1O14639 778 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-205ENST00000414879 HOXB2P14652 356 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 TCF4P15884 667 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 IDH3AP50213 366 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 CHN2P52757 468 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 ACTR3P61158 418 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 RPP38P78345 283 aaKnown RBP11.77□□□□□ -0.53
PTPRF-205ENST00000414879 ZBTB6Q15916 424 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 FBXO43Q4G163 708 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 Q6ZVU0 165 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms