RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 TRIM56Q9BRZ2 755 aaKnown RBP24.7■■□□□ 1.54
CPNE1-207ENST00000414664 P2RY12Q9H244 342 aa24.7■■□□□ 1.54
CPNE1-207ENST00000414664 TMEM9Q9P0T7 183 aa24.7■■□□□ 1.54
CPNE1-207ENST00000414664 CDC23Q9UJX2 597 aa24.7■■□□□ 1.54
CPNE1-207ENST00000414664 FAM169AQ9Y6X4 670 aa24.7■■□□□ 1.54
CPNE1-207ENST00000414664 A0A1W2PNU3 283 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 URI1O94763 535 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 TNFSF15O95150 251 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 MPSTP25325 297 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 PDHA2P29803 388 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 CSTF2P33240 577 aaKnown RBP eCLIP24.69■■□□□ 1.542e-45■■■■■ 66.1
CPNE1-207ENST00000414664 ARL4CP56559 192 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 BBS9Q3SYG4 887 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 ZNF572Q7Z3I7 529 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 PDZD3Q86UT5 571 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 AGBL5Q8NDL9 886 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 ASZ1Q8WWH4 475 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 TFGQ92734 400 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 PRR11Q96HE9 360 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 FERD3LQ96RJ6 166 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 KIR3DX1Q9H7L2 352 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 MVB12BQ9H7P6 319 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 C20orf96Q9NUD7 363 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 INTS10Q9NVR2 710 aaKnown RBP24.69■■□□□ 1.54
CPNE1-207ENST00000414664 SLC24A2Q9UI40 661 aa24.69■■□□□ 1.54
CPNE1-207ENST00000414664 SLC5A10A0PJK1 596 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 H3BMM5 538 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 KPNA5O15131 536 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 APOA4P06727 396 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ITGA2BP08514 1039 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ITGB6P18564 788 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 CAPZBP47756 277 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ADARP55265 1226 aaKnown RBP24.68■■□□□ 1.54
CPNE1-207ENST00000414664 EIF3BP55884 814 aaKnown RBP24.68■■□□□ 1.54
CPNE1-207ENST00000414664 C16orf72Q14CZ0 275 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 BRD3Q15059 726 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 TMED2Q15363 201 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 SNAP47Q5SQN1 464 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 DUS1LQ6P1R4 473 aaKnown RBP24.68■■□□□ 1.54
CPNE1-207ENST00000414664 CILP2Q8IUL8 1156 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 RCBTB1Q8NDN9 531 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ACVR1CQ8NER5 493 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ZNF592Q92610 1267 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 LRRC39Q96DD0 335 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ZDHHC12Q96GR4 267 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ERP44Q9BS26 406 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 RAB33BQ9H082 229 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 ASCL3Q9NQ33 180 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.68■■□□□ 1.54
CPNE1-207ENST00000414664 OGFRQ9NZT2 677 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 SNX24Q9Y343 169 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 FRYQ5TBA9 3013 aa24.68■■□□□ 1.54
CPNE1-207ENST00000414664 MN1Q10571 1320 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-207ENST00000414664 KIF26BQ2KJY2 2108 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 TAF4O00268 1085 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 ESR1P03372 595 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 CCR7P32248 378 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 RPL21P46778 160 aaKnown RBP24.67■■□□□ 1.54
CPNE1-207ENST00000414664 CALCOCO2Q13137 446 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 HIF1AQ16665 826 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 SPANXN3Q5MJ09 141 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 ZNF470Q6ECI4 717 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 LPGAT1Q92604 370 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 EPHA6Q9UF33 1036 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 PISDQ9UG56 409 aa24.67■■□□□ 1.54
CPNE1-207ENST00000414664 IQCF5A8MTL0 148 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 A8MU76 341 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 TOX3O15405 576 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-207ENST00000414664 CAPN5O15484 640 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-207ENST00000414664 RAD51CO43502 376 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 C9P02748 559 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 FMO4P31512 558 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 HSPA14Q0VDF9 509 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 WHAMMP3Q1A5X7 153 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 MSS51Q4VC12 460 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 NAPRTQ6XQN6 538 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 CENPUQ71F23 418 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 ARHGAP22Q7Z5H3 698 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 SNIP1Q8TAD8 396 aaKnown RBP24.66■■□□□ 1.54
CPNE1-207ENST00000414664 GSDMBQ8TAX9 411 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 RSC1A1Q92681 617 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 TGM7Q96PF1 710 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 FAM167BQ9BTA0 163 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 IL1RAPL1Q9NZN1 696 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 KLHL3Q9UH77 587 aa24.66■■□□□ 1.54
CPNE1-207ENST00000414664 UTP11Q9Y3A2 253 aaKnown RBP24.66■■□□□ 1.54
CPNE1-207ENST00000414664 AGRPO00253 132 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 HGFP14210 728 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 AOAHP28039 575 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 TUBB2AQ13885 445 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 CRYMQ14894 314 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 TMEM164Q5U3C3 297 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 OOSP2Q86WS3 158 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 KRT222Q8N1A0 295 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 PHC3Q8NDX5 983 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 LKAAEAR1Q8TD35 194 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 C9orf72Q96LT7 481 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 BIRC8Q96P09 236 aa24.65■■□□□ 1.54
CPNE1-207ENST00000414664 TUBB2BQ9BVA1 445 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms