RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C16orf70Q9BSU1 422 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 TFB2MQ9H5Q4 396 aaKnown RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 APOBEC3GQ9HC16 384 aaKnown RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 ZNF334Q9HCZ1 680 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 TCF7L2Q9NQB0 619 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 MIOSQ9NXC5 875 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 TAAR2Q9P1P5 351 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 CRNNQ9UBG3 495 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 CLIP1P30622 1438 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 SNAPC4Q5SXM2 1469 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 CHD1O14646 1710 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 PRSS51A0A1B0GVH4 220 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 ELOVL7A1L3X0 281 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 A6NL46 340 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 HEPACAM2A8MVW5 462 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 PRR32B1ATL7 298 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 LMX1BO60663 402 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 H1F0P07305 194 aaKnown RBP3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 AKR1B1P15121 316 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 DCTP40126 519 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 LMAN1P49257 510 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 CDK3Q00526 305 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 MBTD1Q05BQ5 628 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 DMP1Q13316 513 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 GRTP1Q5TC63 336 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 STPG1Q5TH74 334 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 MEX3BQ6ZN04 569 aaKnown RBP3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 KRT74Q7RTS7 529 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 AFAP1Q8N556 730 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 APPL2Q8NEU8 664 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 MOSPD2Q8NHP6 518 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 DNASE2BQ8WZ79 361 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 LPGAT1Q92604 370 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 SEMA4DQ92854 862 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 ALG14Q96F25 216 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 GCNAQ96QF7 691 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 ABHD1Q96SE0 405 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 ANKEF1Q9NU02 776 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 NPAP1Q9NZP6 1156 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 CNTNAP2Q9UHC6 1331 aa3.57□□□□□ -1.84
HMGB1P11-201ENST00000413899 CEP170Q5SW79 1584 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 MAP3K1Q13233 1512 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 ZNF608Q9ULD9 1512 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 PDS5BQ9NTI5 1447 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 A0A0B4J293 547 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 MED19A0JLT2 244 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 SYNDIG1LA6NDD5 238 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 OR10H2O60403 315 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 MED24O75448 989 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 ZWINTO95229 277 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 KRT19P08727 400 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 FGF5P12034 268 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 GJA1P17302 382 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 MSH3P20585 1137 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 TIMP3P35625 211 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 PHEXP78562 749 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 CBWD6Q4V339 395 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 CBWD3Q5JTY5 395 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 CFAP58Q5T655 872 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 GPR139Q6DWJ6 353 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 TEX38Q6PEX7 206 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 DENND5BQ6ZUT9 1274 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 MARK2Q7KZI7 788 aaKnown RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 CPSF7Q8N684 471 aaKnown RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 ZNF473Q8WTR7 871 aaKnown RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 MTERF3Q96E29 417 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM81BQ96LP2 452 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 EPYCQ99645 322 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 ABHD6Q9BV23 337 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 SDF2L1Q9HCN8 221 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC38A7Q9NVC3 462 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 TERF2IPQ9NYB0 399 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 NKIRAS2Q9NYR9 191 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 CPSF2Q9P2I0 782 aaKnown RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 RHCGQ9UBD6 479 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 ACAD8Q9UKU7 415 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 PPIEQ9UNP9 301 aaKnown RBP3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 RABGAP1Q9Y3P9 1069 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 GRIP1Q9Y3R0 1128 aa3.56□□□□□ -1.84
HMGB1P11-201ENST00000413899 KIAA0556O60303 1618 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 IQGAP2Q13576 1575 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 MAGI3Q5TCQ9 1506 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 GAPVD1Q14C86 1478 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 A0A087WYN8 130 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 TCRBV21S2A2A0A5A6 115 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC22A3O75751 556 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 CBLP22681 906 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 MT3P25713 68 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 LIG4P49917 911 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 THOP1P52888 689 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 PRKAA1Q13131 559 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 TOMM20Q15388 145 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 KRTAP24-1Q3LI83 254 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 BMP2KLQ5H9B9 411 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 TECRLQ5HYJ1 363 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 NAA16Q6N069 864 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC27A1Q6PCB7 646 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 FIGLAQ6QHK4 219 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 ANO5Q75V66 913 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 TRMT1LQ7Z2T5 733 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms