RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 GOLGA6L19H0YKK7 550 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 GAPDHSO14556 408 aaPredicted RBP16.25■□□□□ 0.19
MRPL55-220ENST00000411464 CST8O60676 142 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 LCA5LO95447 670 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 RNF224P0DH78 156 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 RORAP35398 523 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 SLC1A1P43005 524 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 ABRQ12979 859 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 MPP3Q13368 585 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 FAM69BQ5VUD6 431 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 SLC6A19Q695T7 634 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 ZC3H18Q86VM9 953 aaKnown RBP16.25■□□□□ 0.19
MRPL55-220ENST00000411464 RHOT2Q8IXI1 618 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 SYTL1Q8IYJ3 562 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 RBMXL3Q8N7X1 1067 aaKnown RBP16.25■□□□□ 0.19
MRPL55-220ENST00000411464 Q8NA96 180 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 GLIS1Q8NBF1 620 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 ACVR1CQ8NER5 493 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 OR8K1Q8NGG5 319 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 OR1L3Q8NH93 324 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 LCN9Q8WX39 176 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 P3H4Q92791 437 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 DCUN1D1Q96GG9 259 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 OXNAD1Q96HP4 312 aaPredicted RBP16.25■□□□□ 0.19
MRPL55-220ENST00000411464 SGSM3Q96HU1 749 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 VAT1Q99536 393 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 PCMTD2Q9NV79 361 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 ZNHIT6Q9NWK9 470 aaKnown RBP16.25■□□□□ 0.19
MRPL55-220ENST00000411464 IFNKQ9P0W0 207 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 POMT2Q9UKY4 750 aa16.25■□□□□ 0.19
MRPL55-220ENST00000411464 ICE1Q9Y2F5 2266 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 PRRC2CQ9Y520 2896 aaKnown RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 C2orf81A6NN90 581 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 TPM3P06753 285 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 RALBP11234 206 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 PECAM1P16284 738 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 AGXTP21549 392 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 CDKN2BP42772 138 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 PTPRCAPQ14761 206 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 ASTE1Q2TB18 679 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 BCL7AQ4VC05 210 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 KAZNQ674X7 775 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 RAB43Q86YS6 212 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 ZNF567Q8N184 647 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 ZBTB2Q8N680 514 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 LINC00615Q96LM1 132 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 SMAD5Q99717 465 aaKnown RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 DPH2Q9BQC3 489 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 ASB8Q9H765 288 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 RSPH14Q9UHP6 348 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 PADI2Q9Y2J8 665 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 ARL5AQ9Y689 179 aa16.24■□□□□ 0.19
MRPL55-220ENST00000411464 SPENQ96T58 3664 aaKnown RBP16.24■□□□□ 0.19
MRPL55-220ENST00000411464 MYO9AB2RTY4 2548 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 ENO4A6NNW6 628 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 C9J4A7 227 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 E7EQ34 232 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 SPOPO43791 374 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 SRP72O76094 671 aaKnown RBP16.23■□□□□ 0.19
MRPL55-220ENST00000411464 CAPN1P07384 714 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 HBQ1P09105 142 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 MSL3P1P0C860 447 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 PRDX3P30048 256 aaKnown RBP16.23■□□□□ 0.19
MRPL55-220ENST00000411464 RAPSNQ13702 412 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 ATP1A4Q13733 1029 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 NCF4Q15080 339 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 LLGL1Q15334 1064 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 KYNUQ16719 465 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 PTCHD3Q3KNS1 767 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 FAM198BQ6UWH4 519 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 MAMDC2Q7Z304 686 aaPredicted RBP16.23■□□□□ 0.19
MRPL55-220ENST00000411464 NAT14Q8WUY8 206 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 C19orf60Q96EN9 201 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 RMDN2Q96LZ7 410 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 FERD3LQ96RJ6 166 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 C5AR2Q9P296 337 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 TRHDEQ9UKU6 1024 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 HYOU1Q9Y4L1 999 aa16.23■□□□□ 0.19
MRPL55-220ENST00000411464 ZNF106Q9H2Y7 1883 aaKnown RBP16.22■□□□□ 0.19
MRPL55-220ENST00000411464 CCDC66A2RUB6 948 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 C5orf60A6NFR6 353 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 KRT86O43790 486 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 AGTP01019 485 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 COMTP21964 271 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 NR6A1Q15406 480 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 TAF1AQ15573 450 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-220ENST00000411464 PLEKHN1Q494U1 663 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-220ENST00000411464 ZNF789Q5FWF6 425 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 VWA5B1Q5TIE3 1220 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 DAAM2Q86T65 1068 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 GPR135Q8IZ08 494 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 IQCKQ8N0W5 287 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 LILRA3Q8N6C8 439 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-220ENST00000411464 OR4K2Q8NGD2 314 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 HM13Q8TCT9 377 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 N4BP2L2Q92802 583 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-220ENST00000411464 SNRNP40Q96DI7 357 aaKnown RBP16.22■□□□□ 0.19
MRPL55-220ENST00000411464 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 IP6K3Q96PC2 410 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms