RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 GIPC2Q8TF65 315 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 SMIM14Q96QK8 99 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 NAA50Q9GZZ1 169 aaKnown RBP16.4■□□□□ 0.22
LIMS2-208ENST00000410011 FANCEQ9HB96 536 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 BLOC1S6Q9UL45 172 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 ZNF510Q9Y2H8 683 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 PKP3Q9Y446 797 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 H7C4K7 107 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 CD160O95971 181 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 IMPDH2P12268 514 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 NFKBIAP25963 317 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 SOX11P35716 441 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 C21orf59P57076 290 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 CST9Q5W186 159 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 TAS2R42Q7RTR8 314 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 RBM12BQ8IXT5 1001 aaKnown RBP16.4■□□□□ 0.22
LIMS2-208ENST00000410011 DCBLD1Q8N8Z6 715 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 SLC22A17Q8WUG5 538 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 TRUB1Q8WWH5 349 aaKnown RBP16.4■□□□□ 0.22
LIMS2-208ENST00000410011 SNX19Q92543 992 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 PLEKHA8Q96JA3 519 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 TOR3AQ9H497 397 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 POLR3HQ9Y535 204 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-208ENST00000410011 V9GYQ6 96 aa16.4■□□□□ 0.22
LIMS2-208ENST00000410011 TMX2-CTNND1H3BSU7 103 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 MAGEB3O15480 346 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ZNF7P17097 686 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 CD247P20963 164 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 EEF1B2P24534 225 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 MAP4P27816 1152 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 RGS4P49798 205 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ARPP19P56211 112 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 HUNKP57058 714 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 CYP4F3Q08477 520 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 DUSP4Q13115 394 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 SPIDRQ14159 915 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 MAPKAPK3Q16644 382 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ZIK1Q3SY52 487 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 RUNDC3AQ59EK9 446 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ZC3H12BQ5HYM0 836 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 C6orf141Q5SZD1 244 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 RSPO2Q6UXX9 243 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 CHST15Q7LFX5 561 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 SPARTQ8N0X7 666 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 DDHD1Q8NEL9 900 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 GIPC3Q8TF64 312 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 UBTD2Q8WUN7 234 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 COX4I2Q96KJ9 171 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 C17orf80Q9BSJ5 609 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 NTMT1Q9BV86 223 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ELAC1Q9H777 363 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 BPIFA1Q9NP55 256 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ADGRE2Q9UHX3 823 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 GNPTGQ9UJJ9 305 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 B3GNT3Q9Y2A9 372 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ELOVL7A1L3X0 281 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 CBX4O00257 560 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 TAPBPO15533 448 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 DFNA5O60443 496 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 SLC2A4P14672 509 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 NRIP1P48552 1158 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ARF5P84085 180 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ELAVL2Q12926 359 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 PLA2G4EQ3MJ16 856 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ATG9BQ674R7 924 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 R3HCC1LQ7Z5L2 792 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 PLPP6Q8IY26 295 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 EFHBQ8N7U6 833 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 ZNF555Q8NEP9 628 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 FAM126AQ9BYI3 521 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 SARS2Q9NP81 518 aaKnown RBP16.39■□□□□ 0.21
LIMS2-208ENST00000410011 NAALAD2Q9Y3Q0 740 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 PCDHGA8Q9Y5G5 932 aa16.39■□□□□ 0.21
LIMS2-208ENST00000410011 TRBV5-3A0A0A0MS03 114 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 IQCF5A8MTL0 148 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 GSTA4O15217 222 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 CST1P01037 141 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 ALDH2P05091 517 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 CNPP09543 421 aaKnown RBP16.38■□□□□ 0.21
LIMS2-208ENST00000410011 ATF6P18850 670 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 UGT1A1P22309 533 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 UGT1A4P22310 534 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 UGT1A3P35503 534 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 UGT1A5P35504 534 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 GNPDA1P46926 289 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 BMXP51813 675 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 IL18R1Q13478 541 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 HABP4Q5JVS0 413 aaKnown RBP16.38■□□□□ 0.21
LIMS2-208ENST00000410011 ADGRF1Q5T601 910 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 LINC00299Q6ZSB3 139 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 GPR149Q86SP6 731 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 DENND1CQ8IV53 801 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 ADHFE1Q8IWW8 467 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 MBOAT4Q96T53 435 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 LHPPQ9H008 270 aa16.38■□□□□ 0.21
LIMS2-208ENST00000410011 CLMPQ9H6B4 373 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms