RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CTAGE8P0CG41 777 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 THRAP10827 490 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 RBMS1P29558 406 aaKnown RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CSF2RBP32927 897 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CAPZBP47756 277 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 PREPP48147 710 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 LSSP48449 732 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 LIMK2P53671 638 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 ZFP36L1Q07352 338 aaKnown RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 ZNF658BQ4V348 819 aaPredicted RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 DUPD1Q68J44 220 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CENPUQ71F23 418 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 OTOAQ7RTW8 1153 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 B3GNT8Q7Z7M8 397 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CTAGE6Q86UF2 777 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 PDZD3Q86UT5 571 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CTAGE4Q8IX94 777 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 AGGF1Q8N302 714 aaeCLIP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 FBXO39Q8N4B4 442 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 LILRA3Q8N6C8 439 aaPredicted RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 NCSTNQ92542 709 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 LPGAT1Q92604 370 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CFAP36Q96G28 342 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CNTNAP3BQ96NU0 1288 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 FERD3LQ96RJ6 166 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 TRIM56Q9BRZ2 755 aaKnown RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CNTNAP3Q9BZ76 1288 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 P2RY12Q9H244 342 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 KIR3DX1Q9H7L2 352 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 POLR1BQ9H9Y6 1135 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 IL1RAPL1Q9NZN1 696 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 ZC3H7BQ9UGR2 993 aaKnown RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 CHMP2BQ9UQN3 213 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 COMMD10Q9Y6G5 202 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 MAP1BP46821 2468 aaKnown RBP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 ASPMQ8IZT6 3477 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 MN1Q10571 1320 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 AKAP13Q12802 2813 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 IGHV5-10-1A0A0J9YXX1 117 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 SLC5A10A0PJK1 596 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 E7ESA3 106 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 PLD2O14939 933 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CASC3O15234 703 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 BANF1O75531 89 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 MPOP05164 745 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 JMJD7P0C870 316 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 TYRP1P17643 537 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ITGB6P18564 788 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 FMO4P31512 558 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CSTF2P33240 577 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ELK3P41970 407 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 SLC1A2P43004 574 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 MRPS25P82663 173 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CYP4F3Q08477 520 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 HSPA14Q0VDF9 509 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 PDIA2Q13087 525 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 PRKAA1Q13131 559 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 BRD3Q15059 726 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 MSS51Q4VC12 460 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 HSP90AA5PQ58FG0 334 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ARMC6Q6NXE6 501 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 DUS1LQ6P1R4 473 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 IGF2-ASQ6U949 168 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 XKR5Q6UX68 686 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 KIAA0408Q6ZU52 694 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 RAB11FIP2Q7L804 512 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 OOSP2Q86WS3 158 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CEP112Q8N8E3 955 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ACVR1CQ8NER5 493 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 TFGQ92734 400 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CERS2Q96G23 380 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ZDHHC12Q96GR4 267 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CCDC74BQ96LY2 380 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ZNF578Q96N58 590 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 PHACTR1Q9C0D0 580 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 TRIT1Q9H3H1 467 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 SEMA6CQ9H3T2 930 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 PPANQ9NQ55 473 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 THSD1Q9NS62 852 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 IARS2Q9NSE4 1012 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 ASF1AQ9Y294 204 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 CRYL1Q9Y2S2 319 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 TEX264Q9Y6I9 313 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 APC2O95996 2303 aa10.64□□□□□ -0.71
CHMP3-205ENST00000409810 URB1O60287 2271 aaKnown RBP10.64□□□□□ -0.71
CHMP3-205ENST00000409810 FRYQ5TBA9 3013 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 WDFY3Q8IZQ1 3526 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 FREM2Q5SZK8 3169 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 IGF2RP11717 2491 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 IQCF5A8MTL0 148 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 MATN2O00339 956 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 TOX3O15405 576 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 BRINP1O60477 761 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 DXOO77932 396 aaKnown RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 SLCO2B1O94956 709 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms