RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 IGLV1-44P01699 117 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 PLA2G4BP0C869 781 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 ZNF883P0CG24 379 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 VPREB1P12018 145 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 ITGA3P26006 1051 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 GCH1P30793 250 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 MELKQ14680 651 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 FAM109BQ6ICB4 259 aaPredicted RBP3.74□□□□□ -1.81
PMS1-203ENST00000409593 TMCO3Q6UWJ1 677 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 SZRD1Q7Z422 152 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 FAM114A1Q8IWE2 563 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 FAM120BQ96EK7 910 aaKnown RBP3.74□□□□□ -1.81
PMS1-203ENST00000409593 NSL1Q96IY1 281 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 HACL1Q9UJ83 578 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 KIAA1210Q9ULL0 1709 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 A0A1W2PRB8 838 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 ZNF197O14709 1029 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 TO15178 435 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 SSX4O60224 188 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 WDHD1O75717 1129 aaPredicted RBP3.73□□□□□ -1.81
PMS1-203ENST00000409593 ZWINTO95229 277 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 CLPTM1O96005 669 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 VEGFCP49767 419 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 NAP1L1P55209 391 aaKnown RBP3.73□□□□□ -1.81
PMS1-203ENST00000409593 FCN2Q15485 313 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 RAB41Q5JT25 222 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 HAUS6Q7Z4H7 955 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 ZNF383Q8NA42 475 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 HCAR2Q8TDS4 363 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 ERLEC1Q96DZ1 483 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 RTP3Q9BQQ7 232 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 GFRA4Q9GZZ7 299 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 BLOC1S4Q9NUP1 217 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 ARHGEF38Q9NXL2 777 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 LARSQ9P2J5 1176 aaKnown RBP3.73□□□□□ -1.81
PMS1-203ENST00000409593 RHCGQ9UBD6 479 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 SEC63Q9UGP8 760 aaKnown RBP3.73□□□□□ -1.81
PMS1-203ENST00000409593 PLAGL1Q9UM63 463 aa3.73□□□□□ -1.81
PMS1-203ENST00000409593 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.73□□□□□ -1.816e-6■■□□□ 13.3
PMS1-203ENST00000409593 IGKV3D-15A0A087WSY6 115 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 A0A1W2PQ09 198 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 A6NCN8 305 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 ANTXRLA6NF34 631 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 TRMUO75648 421 aaKnown RBP3.72□□□□□ -1.81
PMS1-203ENST00000409593 NGFP01138 241 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 CEACAM8P31997 349 aaPredicted RBP3.72□□□□□ -1.81
PMS1-203ENST00000409593 CREB5Q02930 508 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 RRS1Q15050 365 aaKnown RBP3.72□□□□□ -1.81
PMS1-203ENST00000409593 ZFP69Q49AA0 526 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 DUSP28Q4G0W2 176 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 ZNF554Q86TJ5 538 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 DDHD1Q8NEL9 900 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 LRRC59Q96AG4 307 aaKnown RBP3.72□□□□□ -1.81
PMS1-203ENST00000409593 ART5Q96L15 291 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 PAFAH2Q99487 392 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 SDF4Q9BRK5 362 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 FNDC11Q9BVV2 318 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
PMS1-203ENST00000409593 ZNF148Q9UQR1 794 aa3.72□□□□□ -1.81
PMS1-203ENST00000409593 AGAP14A8MT82 685 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 SH3BP5O60239 455 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 HMBSP08397 361 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 CEACAM1P13688 526 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 SNX16P57768 344 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 CXCL9Q07325 125 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 ITGA9Q13797 1035 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 LDB1Q86U70 411 aaPredicted RBP3.71□□□□□ -1.81
PMS1-203ENST00000409593 FBXO39Q8N4B4 442 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 CPSF7Q8N684 471 aaKnown RBP3.71□□□□□ -1.81
PMS1-203ENST00000409593 OR1J1Q8NGS3 322 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 WBP1Q96G27 269 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 OR6C1Q96RD1 312 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 ASCL2Q99929 193 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 SPATC1LQ9H0A9 340 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 OSER1Q9NX31 292 aa3.71□□□□□ -1.81
PMS1-203ENST00000409593 ADD3Q9UEY8 706 aaKnown RBP3.71□□□□□ -1.81
PMS1-203ENST00000409593 NR5A2O00482 541 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 PAPSS1O43252 624 aaPredicted RBP3.71□□□□□ -1.82
PMS1-203ENST00000409593 NRIP1P48552 1158 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 ARSEP51690 589 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 PNRC1Q12796 327 aaPredicted RBP3.71□□□□□ -1.82
PMS1-203ENST00000409593 TMEM187Q14656 261 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 DCAF10Q5QP82 559 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 PLEKHS1Q5SXH7 462 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 ZNF497Q6ZNH5 498 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 ZNF485Q8NCK3 441 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 OR2AJ1Q8NGZ0 328 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 TREX2Q9BQ50 279 aaPredicted RBP3.71□□□□□ -1.82
PMS1-203ENST00000409593 C16orf70Q9BSU1 422 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 WDR13Q9H1Z4 485 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 PPIL3Q9H2H8 161 aaKnown RBP3.71□□□□□ -1.82
PMS1-203ENST00000409593 KCNK15Q9H427 330 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 FGF22Q9HCT0 170 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 ACKR4Q9NPB9 350 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 CACNG5Q9UF02 275 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 VPS28Q9UK41 221 aa3.71□□□□□ -1.82
PMS1-203ENST00000409593 PTRH2Q9Y3E5 179 aaKnown RBP3.71□□□□□ -1.82
PMS1-203ENST00000409593 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.7□□□□□ -1.82
PMS1-203ENST00000409593 IGLV9-49A0A0B4J1Y8 123 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms