RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RSC1A1Q92681 617 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 PMEPA1Q969W9 287 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 DNAJC1Q96KC8 554 aaKnown RBP14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 OR6C1Q96RD1 312 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 CTRCQ99895 268 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 WWP1Q9H0M0 922 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 MVB12BQ9H7P6 319 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 GPN2Q9H9Y4 310 aaPredicted RBP14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 SYTL2Q9HCH5 934 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 PAK5Q9P286 719 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 SLC24A2Q9UI40 661 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 TCRBV7S2A1N4TA0A589 114 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 UBA6A0AVT1 1052 aaPredicted RBP14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 TLCD2A6NGC4 264 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 LIN7AO14910 233 aaPredicted RBP14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 DLGAP3O95886 979 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 PRB1P04280 392 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 LIFP15018 202 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 TPH1P17752 444 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 LEPRP48357 1165 aaKnown RBP14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 ARL4DP49703 201 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 SEPHS1P49903 392 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 POU6F1Q14863 301 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 TBR1Q16650 682 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 LINC00303Q3SY05 128 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 TMTC4Q5T4D3 741 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 ARMC3Q5W041 872 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 BORAQ6PGQ7 559 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 PACS1Q6VY07 963 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 THSD4Q6ZMP0 1018 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 SERPINA9Q86WD7 417 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 SIDT2Q8NBJ9 832 aaKnown RBP14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 SEC14L1Q92503 715 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 ULBP3Q9BZM4 244 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 TFB2MQ9H5Q4 396 aaKnown RBP14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 ETNK1Q9HBU6 452 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 TUBD1Q9UJT1 453 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 KCND3Q9UK17 655 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 PADI1Q9ULC6 663 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 PCDHB3Q9Y5E6 796 aa14.18□□□□□ -0.14
NIF3L1-205ENST00000409588 A0A0U1RQJ8 604 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 KDM1AO60341 852 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 ZBTB11O95625 1053 aaPredicted RBP14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 IFNB1P01574 187 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 FTH1P02794 183 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 POLBP06746 335 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 PBLDP30039 288 aaPredicted RBP14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 STAT5AP42229 794 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 SEMA5AQ13591 1074 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 LY6DQ14210 128 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 DNTTIP2Q5QJE6 756 aaKnown RBP14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 PPP1R21Q6ZMI0 780 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 FAM92BQ6ZTR7 304 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 TIPARPQ7Z3E1 657 aaKnown RBP14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 RASGRP3Q8IV61 690 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 LRRC8AQ8IWT6 810 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 D2HGDHQ8N465 521 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 JPH3Q8WXH2 748 aaPredicted RBP14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 FAM96AQ9H5X1 160 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 COG4Q9H9E3 785 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 APMAPQ9HDC9 416 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 C1GALT1Q9NS00 363 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 GEMIN8Q9NWZ8 242 aaKnown RBP14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 RARRES3Q9UL19 164 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 SDK2Q58EX2 2172 aa14.17□□□□□ -0.14
NIF3L1-205ENST00000409588 ZNF106Q9H2Y7 1883 aaKnown RBP14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 BAHCC1Q9P281 2608 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 CFAP46Q8IYW2 2715 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 IGHV5-51A0A0C4DH38 117 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 KIF1CO43896 1103 aaKnown RBP14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 SPAG6O75602 509 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 OR56A5P0C7T3 313 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 MSL3P1P0C860 447 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 MSNP26038 577 aaKnown RBP14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 CCR10P46092 362 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 TUBB4BP68371 445 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 CDK16Q00536 496 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 ACVR1Q04771 509 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 SRSF6Q13247 344 aaKnown RBP14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 TUBB2AQ13885 445 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 SEPT6Q14141 434 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 OR52K1Q8NGK4 314 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 GPR150Q8NGU9 434 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 LCN9Q8WX39 176 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 EXTL1Q92935 676 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 STAMBPL1Q96FJ0 436 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 FERD3LQ96RJ6 166 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 TUBB2BQ9BVA1 445 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 TSSK1BQ9BXA7 367 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 OR52A5Q9H2C5 316 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 SRMSQ9H3Y6 488 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 EIF2B3Q9NR50 452 aaKnown RBP14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 SMARCAL1Q9NZC9 954 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 POLG2Q9UHN1 485 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 PCDHGA6Q9Y5G7 932 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 RPS6KL1Q9Y6S9 549 aa14.16□□□□□ -0.14
NIF3L1-205ENST00000409588 LOC101059948A0A1B0GTJ6 334 aa14.15□□□□□ -0.14
NIF3L1-205ENST00000409588 OR6C74A6NCV1 312 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms