RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TECPR1Q7Z6L1 1165 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 FNDC5Q8NAU1 212 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 DDHD1Q8NEL9 900 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 OR8D1Q8WZ84 308 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 ELMO1Q92556 727 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 FAM83CQ9BQN1 747 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 WRAP53Q9BUR4 548 aaKnown RBP20.31■□□□□ 0.84
USP39-203ENST00000409470 C1orf50Q9BV19 199 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 MRPL40Q9NQ50 206 aaKnown RBP20.31■□□□□ 0.84
USP39-203ENST00000409470 DZANK1Q9NVP4 752 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 PDE10AQ9Y233 779 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 NDUFAF1Q9Y375 327 aa20.31■□□□□ 0.84
USP39-203ENST00000409470 ATG2AQ2TAZ0 1938 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 EDDM13A0A1B0GTR0 161 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 C9JVG2 144 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 NUAK1O60285 661 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 SYNCRIPO60506 623 aaKnown RBP20.3■□□□□ 0.84
USP39-203ENST00000409470 STK16O75716 305 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 AP2A2O94973 939 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 HIST1H2AGP0C0S8 130 aaPredicted RBP20.3■□□□□ 0.84
USP39-203ENST00000409470 HIST1H2ADP20671 130 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 KCNC3Q14003 757 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 GBX1Q14549 363 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 EIF4HQ15056 248 aaKnown RBP20.3■□□□□ 0.84
USP39-203ENST00000409470 PDGFRLQ15198 375 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 HNRNPA1L2Q32P51 320 aaKnown RBP20.3■□□□□ 0.84
USP39-203ENST00000409470 VPS26BQ4G0F5 336 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 METTL2BQ6P1Q9 378 aaKnown RBP20.3■□□□□ 0.84
USP39-203ENST00000409470 HACD2Q6Y1H2 254 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 KBTBD6Q86V97 674 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 VRK3Q8IV63 474 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 BTN2A2Q8WVV5 523 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 AP2M1Q96CW1 435 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 HIST1H2AHQ96KK5 128 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 HIST1H2AJQ99878 128 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 H2AFJQ9BTM1 129 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 NKX2-4Q9H2Z4 354 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 PARVBQ9HBI1 364 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 SPAG4Q9NPE6 437 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 ST14Q9Y5Y6 855 aa20.3■□□□□ 0.84
USP39-203ENST00000409470 PLXNA2O75051 1894 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 OR2AG2A6NM03 316 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 FTH1P02794 183 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 ENO2P09104 434 aaPredicted RBP20.29■□□□□ 0.84
USP39-203ENST00000409470 MPC1LP0DKB6 136 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 EPB42P16452 691 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 C6orf136Q5SQH8 315 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 C9orf64Q5T6V5 341 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 PPP2R2DQ66LE6 453 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 Q6ZSR9 355 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 BEND7Q8N7W2 519 aaPredicted RBP20.29■□□□□ 0.84
USP39-203ENST00000409470 PIP4K2CQ8TBX8 421 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 ROPN1LQ96C74 230 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 NAF1Q96HR8 494 aaKnown RBP20.29■□□□□ 0.84
USP39-203ENST00000409470 HBEGFQ99075 208 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 SLC12A9Q9BXP2 914 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 WNT9AO14904 365 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 CAPN3P20807 821 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 MAGEA10P43363 369 aaPredicted RBP20.29■□□□□ 0.84
USP39-203ENST00000409470 METAP1P53582 386 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 MS4A2Q01362 244 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 CDKL4Q5MAI5 379 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 LDLRAP1Q5SW96 308 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 TANGO2Q6ICL3 276 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 TLDC1Q6P9B6 456 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 FBXL19Q6PCT2 694 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 ADGRG6Q86SQ4 1221 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 DHDDSQ86SQ9 333 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 CHCHD4Q8N4Q1 142 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 FAM156AQ8NDB6 213 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 ASB11Q8WXH4 323 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 GLYATL1Q969I3 302 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 PBX4Q9BYU1 374 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 HPS4Q9NQG7 708 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 OBP2AQ9NY56 170 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 FAM8A1Q9UBU6 413 aa20.29■□□□□ 0.84
USP39-203ENST00000409470 PIK3CGP48736 1102 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 ATXN3P54252 364 aaPredicted RBP20.28■□□□□ 0.84
USP39-203ENST00000409470 GRIK2Q13002 908 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 ZNF234Q14588 700 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 ABRAXAS2Q15018 415 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 NR6A1Q15406 480 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 BLOC1S3Q6QNY0 202 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 GPR149Q86SP6 731 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 RETREG3Q86VR2 466 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 SFTPA1Q8IWL2 248 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 RAVER1Q8IY67 606 aaKnown RBP20.28■□□□□ 0.84
USP39-203ENST00000409470 NRSN1Q8IZ57 195 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 SFRP1Q8N474 314 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 TMIEQ8NEW7 156 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 BHLHE22Q8NFJ8 381 aaPredicted RBP20.28■□□□□ 0.84
USP39-203ENST00000409470 ASZ1Q8WWH4 475 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 CDCA3Q99618 268 aaPredicted RBP20.28■□□□□ 0.84
USP39-203ENST00000409470 ZFP14Q9HCL3 533 aa20.28■□□□□ 0.84
USP39-203ENST00000409470 TBC1D3BA6NDS4 549 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 PSMD11O00231 422 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 QSOX1O00391 747 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SGTAO43765 313 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 CYP2A7P20853 494 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 FCARP24071 287 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms