RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CXCR3P49682 368 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 SERPINH1P50454 418 aaKnown RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 ST13P50502 369 aaKnown RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 WNT3AP56704 352 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 NCS1P62166 190 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 PHC1P78364 1004 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 IL5RAQ01344 420 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 PRKG2Q13237 762 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 CATSPEREQ5SY80 951 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 EFL1Q7Z2Z2 1120 aaKnown RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 POC5Q8NA72 575 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 RHEBL1Q8TAI7 183 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 FIG4Q92562 907 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 EDEM1Q92611 657 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 SLIRPQ9GZT3 109 aaKnown RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 TP63Q9H3D4 680 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 CNGB3Q9NQW8 809 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 OGDHLQ9ULD0 1010 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 S1PR4O95977 384 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 MTHFD2P13995 350 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 ERVK-8P63133 956 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 ZNF181Q2M3W8 571 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 ATP6AP1LQ52LC2 224 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 CCDC81Q6ZN84 652 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 VASH1Q7L8A9 365 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-205ENST00000409455 PRSS48Q7RTY5 328 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 LGI2Q8N0V4 545 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 EID3Q8N140 333 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 LILRB4Q8NHJ6 448 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 FBXO30Q8TB52 745 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 CNIH3Q8TBE1 160 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 GIPC2Q8TF65 315 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 TMEM209Q96SK2 561 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 ALOXE3Q9BYJ1 711 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 TMEM30AQ9NV96 361 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 EXD2Q9NVH0 621 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 SMPD4Q9NXE4 827 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 CDH9Q9ULB4 789 aa15.21■□□□□ 0.03
LIMS2-205ENST00000409455 A0A1B0GTL3 188 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 SUPT3HB4E1H0 165 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 H0Y626 953 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 M0QZQ0 153 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ENPP3O14638 875 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 BCKDKO14874 412 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 AREL1O15033 823 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 GSTA4O15217 222 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 TRIM16O95361 564 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 FDXRP22570 491 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 CDK5R2Q13319 367 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 TIGD7Q6NT04 549 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ZFAND4Q86XD8 727 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 LRRC49Q8IUZ0 686 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ARHGAP12Q8IWW6 846 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 DPP10Q8N608 796 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 MCFD2Q8NI22 146 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 SH3RF2Q8TEC5 729 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 SLC47A1Q96FL8 570 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 UROC1Q96N76 676 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 NUSAP1Q9BXS6 441 aaKnown RBP15.2■□□□□ 0.02
LIMS2-205ENST00000409455 TRIT1Q9H3H1 467 aaKnown RBP15.2■□□□□ 0.02
LIMS2-205ENST00000409455 MFSD1Q9H3U5 465 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 NEK6Q9HC98 313 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 FRMPD3Q5JV73 1810 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 PAPSS2O95340 614 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ZNF37AP17032 561 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-205ENST00000409455 PCSK1P29120 753 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 BMPR1AP36894 532 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ARPC4P59998 168 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 VAC14Q08AM6 782 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 LAPTM5Q13571 262 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 RFX4Q33E94 735 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 HABP4Q5JVS0 413 aaKnown RBP15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ENPP6Q6UWR7 440 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 FBXO39Q8N4B4 442 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 FAM86B1Q8N7N1 296 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 FNDC5Q8NAU1 212 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 DHRS1Q96LJ7 313 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 BTBD2Q9BX70 525 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 ERVK-18Q9QC07 812 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 LIMD1Q9UGP4 676 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 SLCO3A1Q9UIG8 710 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 TPRKBQ9Y3C4 175 aa15.2■□□□□ 0.02
LIMS2-205ENST00000409455 CYP11A1P05108 521 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 ACVR2AP27037 513 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 IL12AP29459 219 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 MAP2K4P45985 399 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 TRPC1P48995 793 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 DSC1Q08554 894 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 CAMK2BQ13554 666 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 SELPLGQ14242 412 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 XKR7Q5GH72 579 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 SYT6Q5T7P8 510 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-205ENST00000409455 ANKS6Q68DC2 871 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 TAS2R42Q7RTR8 314 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 NECAB2Q7Z6G3 386 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 METTL23Q86XA0 190 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 ADHFE1Q8IWW8 467 aa15.19■□□□□ 0.02
LIMS2-205ENST00000409455 SETD9Q8NE22 299 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms