RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CNTN6Q9UQ52 1028 aa24.69■■□□□ 1.54
SPIRE1-202ENST00000409402 CYP2U1Q7Z449 544 aa24.69■■□□□ 1.54
SPIRE1-202ENST00000409402 LRRTM4Q86VH4 590 aa24.69■■□□□ 1.54
SPIRE1-202ENST00000409402 GTPBP2Q9BX10 602 aaKnown RBP24.69■■□□□ 1.54
SPIRE1-202ENST00000409402 PDP1Q9P0J1 537 aaPredicted RBP24.69■■□□□ 1.54
SPIRE1-202ENST00000409402 U3KQV3 271 aa24.69■■□□□ 1.54
SPIRE1-202ENST00000409402 ZNF460Q14592 562 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 NPY5RQ15761 445 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 METTL21CQ5VZV1 264 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 ABHD13Q7L211 337 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 COX18Q8N8Q8 333 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 AP3S1Q92572 193 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 PNPLA3Q9NST1 481 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 C9J4A7 227 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 NPHS1O60500 1241 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 HOXB2P14652 356 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 SNPHO15079 494 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 CHRNA4P43681 627 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 KCNQ1P51787 676 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 GDF10P55107 478 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 MED22Q15528 200 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 MYLK3Q32MK0 819 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 OR13C4Q8NGS5 318 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 HS3ST4Q9Y661 456 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 SNED1Q8TER0 1413 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 DNAJA2O60884 412 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 MTHFRP42898 656 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 TMPRSS11AQ6ZMR5 421 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 Q6ZVU0 165 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 TFB2MQ9H5Q4 396 aaKnown RBP24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 ENTPD5O75356 428 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 KHKP50053 298 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 DCST1Q5T197 706 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 SPPL2CQ8IUH8 684 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 SLC35G5Q96KT7 338 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 CCM2Q9BSQ5 444 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 GSDMCQ9BYG8 508 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 ITM2CQ9NQX7 267 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 CKLFQ9UBR5 152 aa24.68■■□□□ 1.54
SPIRE1-202ENST00000409402 ALPIP09923 528 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 RYKP34925 604 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 GALNT7Q86SF2 657 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 ZBED6CLQ96FA7 236 aaPredicted RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 RAD9AQ99638 391 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 KLF15Q9UIH9 416 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 TNFRSF11BO00300 401 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 SRP54P61011 504 aaKnown RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 RPL26L1Q9UNX3 145 aaKnown RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 RIIAD1A6NNX1 92 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 MAGEB17A8MXT2 336 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 PLIN3O60664 434 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 TYRP14679 529 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 PTDSS1P48651 473 aaKnown RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 ARFIP1P53367 373 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 KCNJ2P63252 427 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 SUZ12Q15022 739 aaKnown RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 FSTL5Q8N475 847 aaPredicted RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 HCAR2Q8TDS4 363 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 BCO2Q9BYV7 579 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 TTYH3Q9C0H2 523 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 SSU72Q9NP77 194 aaKnown RBP24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 SNAPC1Q16533 368 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 RASGRP3Q8IV61 690 aa24.67■■□□□ 1.54
SPIRE1-202ENST00000409402 MTMR11A4FU01 709 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 NEMP2A6NFY4 417 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 K7EPI3 171 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 CASRP41180 1078 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 TLL2Q9Y6L7 1015 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 PTPN5P54829 565 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 SLC10A7Q0GE19 358 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 NCBP2-AS2Q69YL0 99 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 CDH7Q9ULB5 785 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 FADS2P1A8MWK0 482 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 UPK3BL1B0FP48 263 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 UPK3BL2E5RIL1 263 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 PIP5K1BO14986 540 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 TAS2R39P59534 338 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 CMTM8Q8IZV2 173 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 CNTD1Q8N815 330 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 PIGXQ8TBF5 258 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 ARL8BQ9NVJ2 186 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 KHDRBS3O75525 346 aaKnown RBP24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 TBC1D25Q3MII6 688 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 REP15Q6BDI9 236 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 OR2T34Q8NGX1 318 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 OR2T3Q8NH03 318 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 COQ7Q99807 217 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 C8orf4Q9NR00 106 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 DBTP11182 482 aaKnown RBP24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 ZNF30P17039 623 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 FCRL4Q96PJ5 515 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 FAM192AQ9GZU8 254 aa24.66■■□□□ 1.54
SPIRE1-202ENST00000409402 LIN7AO14910 233 aaPredicted RBP24.65■■□□□ 1.54
SPIRE1-202ENST00000409402 UGT1A9O60656 530 aa24.65■■□□□ 1.54
SPIRE1-202ENST00000409402 ZNF8P17098 575 aaPredicted RBP24.65■■□□□ 1.54
SPIRE1-202ENST00000409402 UGT1A6P19224 532 aa24.65■■□□□ 1.54
SPIRE1-202ENST00000409402 UGT1A1P22309 533 aa24.65■■□□□ 1.54
SPIRE1-202ENST00000409402 UGT1A4P22310 534 aa24.65■■□□□ 1.54
SPIRE1-202ENST00000409402 UGT1A3P35503 534 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms