RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RFLNAQ6ZTI6 216 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SPATC1Q76KD6 591 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 DCP1BQ8IZD4 617 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 INPP5KQ9BT40 448 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 TIMMDC1Q9NPL8 285 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 TAS2R16Q9NYV7 291 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 OPTCQ9UBM4 332 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 MALT1Q9UDY8 824 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 ABT1Q9ULW3 272 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 PDE10AQ9Y233 779 aa8.2□□□□□ -1.1
SNX13-201ENST00000409076 SAMHD1Q9Y3Z3 626 aaKnown RBP8.2□□□□□ -1.1
SNX13-201ENST00000409076 A0A0G2JN53 185 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 TRIM24O15164 1050 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 RNF144AP50876 292 aaPredicted RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 TNK2Q07912 1038 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CRY1Q16526 586 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CES5AQ6NT32 575 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 THAP5Q7Z6K1 395 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 IGFN1Q86VF2 1251 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 SLC22A16Q86VW1 577 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 HIPK1Q86Z02 1210 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 NLGN4XQ8N0W4 816 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 EID3Q8N140 333 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 NTAN1Q96AB6 310 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 TMEM125Q96AQ2 219 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 RTP3Q9BQQ7 232 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 TSEN34Q9BSV6 310 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 NDEL1Q9GZM8 345 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 C14orf119Q9NWQ9 140 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 BLOC1S6Q9UL45 172 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 EIF3LQ9Y262 564 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 SPTBP11277 2137 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 RGPD3A6NKT7 1758 aaPredicted RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 RGPD4Q7Z3J3 1758 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 LOC730098B7Z3J9 87 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 BCKDKO14874 412 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 LSM1O15116 133 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 TBL1XO60907 577 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 TSC22D2O75157 780 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 ULK1O75385 1050 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CAPN15O75808 1086 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 TACR2P21452 398 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 EPHA2P29317 976 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 S100A3P33764 101 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 RFC2P35250 354 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PLA2G16P53816 162 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 MLLT10P55197 1068 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CD47Q08722 323 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 GTF2H2Q13888 395 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 STARD3Q14849 445 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 IER5LQ5T953 404 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 SULT1C3Q6IMI6 304 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PPP4R4Q6NUP7 873 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 GTF2H2CQ6P1K8 395 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 ANKS3Q6ZW76 656 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 ADGRG2Q8IZP9 1017 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 C2orf69Q8N8R5 385 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 MDGA1Q8NFP4 955 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PROX1Q92786 737 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 NELL1Q92832 810 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 BORCS5Q969J3 196 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CGREF1Q99674 301 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 HIPK3Q9H422 1215 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CARS2Q9HA77 564 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 SPASTQ9UBP0 616 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 SSC5DA1L4H1 1573 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 FUOMA2VDF0 154 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 FXYD1O00168 92 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CXCR6O00574 342 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 LDB2O43679 373 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 CLDN7O95471 211 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PRAMEF1O95521 474 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 ASGR1P07306 291 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 OR1D2P34982 312 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 ARHGDIAP52565 204 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 APOFQ13790 326 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 DAG1Q14118 895 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 ADRM1Q16186 407 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PHKG1Q16816 387 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 VARS2Q5ST30 1063 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 CYHR1Q6ZMK1 362 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 FAR1Q8WVX9 515 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 NODALQ96S42 347 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PARK7Q99497 189 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 RBM38Q9H0Z9 239 aaKnown RBP8.19□□□□□ -1.1
SNX13-201ENST00000409076 MAGEE1Q9HCI5 957 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 PCDHB5Q9Y5E4 795 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 WDR87Q6ZQQ6 2873 aa8.19□□□□□ -1.1
SNX13-201ENST00000409076 A0A1W2PP18 115 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TCRBV3S1A0A5B6 114 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 FGF10O15520 208 aaPredicted RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 WDR47O94967 919 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ALDH9A1P49189 494 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 EMP3P54852 163 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 MEF2AQ02078 507 aaPredicted RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 RAPSNQ13702 412 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 UPP1Q16831 310 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms