RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATP6V1E1P36543 226 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 CRKLP46109 303 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 CLDN20P56880 219 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 BPIFB3P59826 476 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 SNRPEP62304 92 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 HNF4GQ14541 408 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 LASP1Q14847 261 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 RRS1Q15050 365 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 SHEQ5VZ18 495 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 RUSC1-AS1Q66K80 236 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZBTB49Q6ZSB9 765 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 C11orf57Q6ZUT1 292 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 DET1Q7L5Y6 550 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 SYCP3Q8IZU3 236 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 NHLRC2Q8NBF2 726 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 OIT3Q8WWZ8 545 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 KRT35Q92764 455 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 PDLIM5Q96HC4 596 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 PRMT6Q96LA8 375 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 SEMA3CQ99985 751 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 INPP5KQ9BT40 448 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 MMTAG2Q9BU76 263 aaKnown RBP4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 IL36RNQ9UBH0 155 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 NME7Q9Y5B8 376 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 INSL5Q9Y5Q6 135 aa4.77□□□□□ -1.65
HMGB1P13-201ENST00000406019 IGHV4-28A0A0C4DH34 117 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 RPS10-NUDT3A0A1W2PQS6 291 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 LRRD1A4D1F6 860 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 GOLGA6L9A6NEM1 432 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 FAM86B1E9PN63 330 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 CLDN4O14493 209 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 HS3ST1O14792 307 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZNF263O14978 683 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 SPRY3O43610 288 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ITM2AO43736 263 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 TSPAN1O60635 241 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 FAM86B2P0C5J1 330 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 NAGAP17050 411 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 TIA1P31483 386 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 CDKN2AP42771 156 aaKnown RBP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ASCL1P50553 236 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 POLR2LP62875 67 aaKnown RBP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ABATP80404 500 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 PRKCZQ05513 592 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 TROAPQ12815 778 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 GPS2Q13227 327 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 DNTTIP2Q5QJE6 756 aaKnown RBP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ALS2CLQ60I27 953 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 NHLRC1Q6VVB1 395 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 SPATA21Q7Z572 469 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 HOOK3Q86VS8 718 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ACVR1CQ8NER5 493 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 CTCFLQ8NI51 663 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 THAP6Q8TBB0 222 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 DNASE1L2Q92874 299 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLAMF9Q96A28 289 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 SPDL1Q96EA4 605 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ATP6V0BQ99437 205 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 PARK7Q99497 189 aaKnown RBP4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 FEVQ99581 238 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 KATNB1Q9BVA0 655 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 HIPK2Q9H2X6 1198 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 MID1IP1Q9NPA3 183 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ABCB8Q9NUT2 735 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ERAP1Q9NZ08 941 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 RHCGQ9UBD6 479 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 SNX7Q9UNH6 387 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 PAM16Q9Y3D7 125 aa4.76□□□□□ -1.65
HMGB1P13-201ENST00000406019 ATXN2Q99700 1313 aaKnown RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 TAF1P21675 1872 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 OR2M5A3KFT3 312 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 C19orf81C9J6K1 198 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 PLK4O00444 970 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 GCNT3O95395 438 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 NGFRP08138 427 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 TCF4P15884 667 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 HOXB6P17509 224 aaKnown RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 GNAZP19086 355 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 HLA-DPA1P20036 260 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 CASP3P42574 277 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 CTSCP53634 463 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 ASIC1P78348 528 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 ROR2Q01974 943 aaKnown RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 CRYZQ08257 329 aaKnown RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 GPR18Q14330 331 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 UGCGQ16739 394 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 AMZ1Q400G9 498 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 FAM69BQ5VUD6 431 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 PRR27Q6MZM9 219 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC27A1Q6PCB7 646 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 Q75L30 129 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 RBM23Q86U06 439 aaKnown RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 TLK2Q86UE8 772 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC5A8Q8N695 610 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 MIGA1Q8NAN2 632 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms