RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ZNF852Q6ZMS4 543 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 TIFABQ6ZNK6 161 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 PRR23BQ6ZRT6 265 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 GK5Q6ZS86 529 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 RPS27LQ71UM5 84 aaKnown RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 SPPL2AQ8TCT8 520 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 RANBP9Q96S59 729 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 TBC1D10AQ9BXI6 508 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 ERVK-6Q9BXR3 956 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 ZNF556Q9HAH1 456 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 HEBP1Q9NRV9 189 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 FAF1Q9UNN5 650 aaPredicted RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 MTF2Q9Y483 593 aaPredicted RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 B4DGG1 531 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 AURKAO14965 403 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 ITM2AO43736 263 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 OR1F1O43749 312 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 LILRB3O75022 631 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 TGDSO95455 350 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 ADRB3P13945 408 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 CDH2P19022 906 aaPredicted RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 EPORP19235 508 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 BDKRB1P46663 353 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 PSME3P61289 254 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 RPS21P63220 83 aaKnown RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 VAC14Q08AM6 782 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 CDHR3Q6ZTQ4 885 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 DHFR2Q86XF0 187 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 RP9Q8TA86 221 aaKnown RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 CLIP3Q96DZ5 547 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 OR52E6Q96RD3 313 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 PANX1Q96RD7 426 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 GPR174Q9BXC1 333 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 RC3H2Q9HBD1 1191 aaKnown RBP8.94□□□□□ -0.98
LIG4-202ENST00000405925 ITM2CQ9NQX7 267 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 IL17CQ9P0M4 197 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 SLC22A14Q9Y267 594 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 NUMBLQ9Y6R0 609 aa8.94□□□□□ -0.98
LIG4-202ENST00000405925 NUP205Q92621 2012 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 PLXNB2O15031 1838 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 RHPN2P1A8MT19 583 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 KCNH1O95259 989 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ANXA6P08133 673 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 GNSP15586 552 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ZNF8P17098 575 aaPredicted RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 IMPDH1P20839 514 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 CMPK1P30085 196 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 LSM12Q3MHD2 195 aaKnown RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 FBXO43Q4G163 708 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ACSBG2Q5FVE4 666 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ATAD3BQ5T9A4 648 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 IRGCQ6NXR0 463 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 GCNT7Q6ZNI0 430 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 GPR135Q8IZ08 494 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 CYGBQ8WWM9 190 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 KIAA1191Q96A73 305 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 HIC2Q96JB3 615 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 EBF4Q9BQW3 602 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 DCLRE1BQ9H816 532 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 FZD3Q9NPG1 666 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ARL8BQ9NVJ2 186 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ZNFX1Q9P2E3 1918 aaKnown RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 TMEM233B4DJY2 109 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 MUSKO15146 869 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 AXIN1O15169 862 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 KMOO15229 486 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 CCNDBP1O95273 360 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 BMP10O95393 424 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 IFNA16P05015 189 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 RPL34P49207 117 aaKnown RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 KCNJ2P63252 427 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 MPP2Q14168 576 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 TGFBIQ15582 683 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 DUSP6Q16828 381 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 PTCHD3Q3KNS1 767 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 DGKKQ5KSL6 1271 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ANKRD54Q6NXT1 300 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ADGRD2Q7Z7M1 963 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 GPR149Q86SP6 731 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 TRAM1L1Q8N609 369 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 FITM2Q8N6M3 262 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 WFDC5Q8TCV5 224 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 WBP2Q969T9 261 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 DERL2Q9GZP9 239 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 SIRPGQ9P1W8 387 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 DHRS7Q9Y394 339 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 PCDHGA11Q9Y5H2 935 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 RFXANKO14593 260 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 SHOX2O60902 331 aaPredicted RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 RNGTTO60942 597 aaKnown RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 ATP6V1B2P21281 511 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ATP6V1E1P36543 226 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 CCNFP41002 786 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 PTPN5P54829 565 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 MLLT1Q03111 559 aaPredicted RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 USP39Q53GS9 565 aaKnown RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 ZNF789Q5FWF6 425 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms