RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 OTUB2Q96DC9 234 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 IMP4Q96G21 291 aaKnown RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 ZNF599Q96NL3 588 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 YTHDF1Q9BYJ9 559 aaKnown RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 TRIM15Q9C019 465 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 GIN1Q9NXP7 522 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 EGFL7Q9UHF1 273 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 FCF1Q9Y324 198 aaKnown RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 SLC9A3R1O14745 358 aaPredicted RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 CLPXO76031 633 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 LAMP2P13473 410 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 ATP5F1P24539 256 aaPredicted RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 OXTRP30559 389 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 CCDC85BQ15834 202 aaPredicted RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 PCSK7Q16549 785 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 TMTC4Q5T4D3 741 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 KLHDC8BQ8IXV7 354 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 SEMA3CQ99985 751 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 MRPL57Q9BQC6 102 aaKnown RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 SLC25A51Q9H1U9 297 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 ZFP14Q9HCL3 533 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 SMPD3Q9NY59 655 aaPredicted RBP23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 ABCD2Q9UBJ2 740 aa23.17■■□□□ 1.3
TRIOBP-203ENST00000403663 ERI2A8K979 691 aaKnown RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 SMAD6O43541 496 aaKnown RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 CNOT3O75175 753 aaKnown RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 STMN1P16949 149 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 TRIM16LQ309B1 348 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 USP51Q70EK9 711 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 CUZD1Q86UP6 607 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 ADGRG5Q8IZF4 528 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 PCYOX1LQ8NBM8 494 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 PDPRQ8NCN5 879 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 PNPT1Q8TCS8 783 aaKnown RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 RPL10LQ96L21 214 aaKnown RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 FAM83CQ9BQN1 747 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 PKD2L2Q9NZM6 624 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 MARK1Q9P0L2 795 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 JAK1P23458 1154 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 STK19P49842 368 aaPredicted RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 PRPSAP1Q14558 356 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 OXA1LQ15070 435 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 CCNYL2Q5T2Q4 361 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 LCN8Q6JVE9 175 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 RPS27LQ71UM5 84 aaKnown RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 GOLM1Q8NBJ4 401 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 HDAC10Q969S8 669 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 MRGPRX2Q96LB1 330 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 RIPOR3Q96MK2 946 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 PSKH2Q96QS6 385 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 OLFM1Q99784 485 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 SOX17Q9H6I2 414 aaPredicted RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 HPS4Q9NQG7 708 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 C8orf4Q9NR00 106 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 ATAD3AQ9NVI7 634 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 IFT80Q9P2H3 777 aaPredicted RBP23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 SEPT3Q9UH03 358 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 TRIOO75962 3097 aa23.16■■□□□ 1.3
TRIOBP-203ENST00000403663 COL6A3P12111 3177 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 GAB4Q2WGN9 574 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 FAM219BQ5XKK7 198 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 TMEM215Q68D42 235 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 KDELC1Q6UW63 502 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 CCDC117Q8IWD4 279 aaPredicted RBP23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 DENND6AQ8IWF6 608 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 DDIASQ8IXT1 998 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 AFAP1L2Q8N4X5 818 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 HEXDCQ8WVB3 486 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 CINPQ9BW66 212 aaPredicted RBP23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 MAP10Q9P2G4 905 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 FAM95CA0A1B0GW59 222 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 KPNA4O00629 521 aaPredicted RBP23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 SEC14L2O76054 403 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 ADH5P11766 374 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 CHRNA4P43681 627 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 PLCL1Q15111 1095 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 MGME1Q9BQP7 344 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 FICDQ9BVA6 458 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 POLR1EQ9GZS1 481 aaKnown RBP23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 IL1RL2Q9HB29 575 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 FANCEQ9HB96 536 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 FBRSL1Q9HCM7 1045 aaKnown RBP23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 CYP4F12Q9HCS2 524 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 SPATA7Q9P0W8 599 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 PSME2Q9UL46 239 aa23.15■■□□□ 1.3
TRIOBP-203ENST00000403663 JUNBP17275 347 aaPredicted RBP23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 KCNA5P22460 613 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 CTBP1Q13363 440 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 ZNF773Q6PK81 442 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 CYHR1Q6ZMK1 362 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 TRPV3Q8NET8 790 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 SNX19Q92543 992 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 C2orf49Q9BVC5 232 aaPredicted RBP23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 KIFC1Q9BW19 673 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 GPN2Q9H9Y4 310 aaPredicted RBP23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 EML4Q9HC35 981 aaKnown RBP23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 ACTR3BQ9P1U1 418 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 TSC22D4Q9Y3Q8 395 aa23.14■■□□□ 1.3
TRIOBP-203ENST00000403663 AQP9O43315 295 aa23.14■■□□□ 1.29
TRIOBP-203ENST00000403663 ANXA9O76027 345 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms