RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 MAGED4Q96JG8 741 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 SERPINB11Q96P15 392 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ZNF347Q96SE7 839 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 BARD1Q99728 777 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 RTP3Q9BQQ7 232 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ZBED2Q9BTP6 218 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 CINPQ9BW66 212 aaPredicted RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 ALOXE3Q9BYJ1 711 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 TFB2MQ9H5Q4 396 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 DDX28Q9NUL7 540 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 RNF181Q9P0P0 153 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 C2orf81A6NN90 581 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ZNF701M0R085 212 aaPredicted RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 SLC1A7O00341 560 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 EEDO75530 441 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 SEC14L2O76054 403 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 MMP2P08253 660 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 NEK2P51955 445 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 EMX2Q04743 252 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 DDX39BQ13838 428 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 DGUOKQ16854 277 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 LIX1Q8N485 282 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 RSPH1Q8WYR4 309 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 FBXO32Q969P5 355 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 MYEOVQ96EZ4 313 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 TDRD1Q9BXT4 1180 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 NDEL1Q9GZM8 345 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 RUBCNLQ9H714 662 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 WWOXQ9NZC7 414 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 C3orf18Q9UK00 162 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 WDR37Q9Y2I8 494 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 GMPPBQ9Y5P6 360 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 SNX8Q9Y5X2 465 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ELOVL7A1L3X0 281 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 MATN4O95460 622 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 CPSF4O95639 269 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 MLYCDO95822 493 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ENO2P09104 434 aaPredicted RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 GJA5P36382 358 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ARHGDIAP52565 204 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 CDC42EP1Q00587 391 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 IFITM3Q01628 133 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 GALNT1Q10472 559 aaPredicted RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 DPY19L1Q2PZI1 675 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ADPRMQ3LIE5 342 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 AGMOQ6ZNB7 445 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 GPC2Q8N158 579 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 SCML4Q8N228 414 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 KLHDC9Q8NEP7 349 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 SLC13A3Q8WWT9 602 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ZHX1-C8orf76Q96EF9 292 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 REXO4Q9GZR2 422 aaKnown RBP9.03□□□□□ -0.96
HPS4-203ENST00000402105 TLR9Q9NR96 1032 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 SCN3BQ9NY72 215 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 MARCH2Q9P0N8 246 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 PCTPQ9UKL6 214 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 ZNF451Q9Y4E5 1061 aa9.03□□□□□ -0.96
HPS4-203ENST00000402105 PRRC2BQ5JSZ5 2229 aaKnown RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 VPS4BO75351 444 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 LCKP06239 509 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 INHBBP09529 407 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 ATXN1LP0C7T5 689 aaKnown RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 PKMP14618 531 aaKnown RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 IGFBP5P24593 272 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 DNAJB1P25685 340 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 HTR1EP28566 365 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 RGRP47804 291 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 SERPINB10P48595 397 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 KCNQ1P51787 676 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 HK3P52790 923 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 TIAL1Q01085 375 aaKnown RBP eCLIP9.02□□□□□ -0.96
HPS4-203ENST00000402105 EPS8Q12929 822 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 TSTA3Q13630 321 aaPredicted RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 INAVAQ3KP66 663 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 MSANTD2Q6P1R3 559 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 MBOAT1Q6ZNC8 495 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 P2RY8Q86VZ1 359 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 MCFD2Q8NI22 146 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 ARRDC2Q8TBH0 407 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 BRSK1Q8TDC3 778 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 NETO1Q8TDF5 533 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 NSMCE3Q96MG7 304 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 CORO1BQ9BR76 489 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 MRM3Q9HC36 420 aaKnown RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 PAK1IP1Q9NWT1 392 aaPredicted RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 TMEM9Q9P0T7 183 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 EIF3LQ9Y262 564 aaKnown RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 CAB39Q9Y376 341 aaPredicted RBP9.02□□□□□ -0.96
HPS4-203ENST00000402105 PPP2R3BQ9Y5P8 575 aa9.02□□□□□ -0.96
HPS4-203ENST00000402105 TYW5A2RUC4 315 aaKnown RBP9.02□□□□□ -0.97
HPS4-203ENST00000402105 A8MV72 311 aaPredicted RBP9.02□□□□□ -0.97
HPS4-203ENST00000402105 PRMT5O14744 637 aaPredicted RBP9.02□□□□□ -0.97
HPS4-203ENST00000402105 CACNG3O60359 315 aa9.02□□□□□ -0.97
HPS4-203ENST00000402105 UGT2B4P06133 528 aa9.02□□□□□ -0.97
HPS4-203ENST00000402105 HTR1AP08908 422 aa9.02□□□□□ -0.97
HPS4-203ENST00000402105 BMP4P12644 408 aa9.02□□□□□ -0.97
HPS4-203ENST00000402105 TCEA1P23193 301 aaKnown RBP9.02□□□□□ -0.97
HPS4-203ENST00000402105 CYP2C18P33260 490 aa9.02□□□□□ -0.97
HPS4-203ENST00000402105 NUDT6P53370 316 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms