RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 LINC00615Q96LM1 132 aaPredicted RBP11.71□□□□□ -0.53
TFF3-202ENST00000398431 RMDN2Q96LZ7 410 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 NUDT9Q9BW91 350 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 TLR10Q9BXR5 811 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 NLNQ9BYT8 704 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 SPTLC3Q9NUV7 552 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 PCMTD2Q9NV79 361 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 TCFL5Q9UL49 500 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 PKP3Q9Y446 797 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 PCDHGB7Q9Y5F8 929 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 ARL5AQ9Y689 179 aa11.71□□□□□ -0.53
TFF3-202ENST00000398431 HIVEP3Q5T1R4 2406 aa11.71□□□□□ -0.54
TFF3-202ENST00000398431 BTN3A3O00478 584 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 ZNF185O15231 689 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 STX7O15400 261 aaKnown RBP11.7□□□□□ -0.54
TFF3-202ENST00000398431 TMEM63AO94886 807 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 POLBP06746 335 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 MSH3P20585 1137 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 SLC1A1P43005 524 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 GSDMDP57764 484 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 MPP3Q13368 585 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 OLIG2Q13516 323 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 TFDP2Q14188 446 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 EIF2S3LQ2VIR3 472 aaKnown RBP11.7□□□□□ -0.54
TFF3-202ENST00000398431 ZNF658BQ4V348 819 aaPredicted RBP11.7□□□□□ -0.54
TFF3-202ENST00000398431 BCL7AQ4VC05 210 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 TMTC4Q5T4D3 741 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 KAZNQ674X7 775 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 FAM198BQ6UWH4 519 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 RANBP10Q6VN20 620 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 SPOCD1Q6ZMY3 1216 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 MICALCLQ6ZW33 695 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 DAAM2Q86T65 1068 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 VSTM4Q8IW00 320 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 RHOT2Q8IXI1 618 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 CFAP206Q8IYR0 622 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 GLIS1Q8NBF1 620 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 OR4K2Q8NGD2 314 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 CPT1BQ92523 772 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 VAT1Q99536 393 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 TRIM5Q9C035 493 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 C10orf88Q9H8K7 445 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 C1GALT1Q9NS00 363 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 LUZP4Q9P127 313 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 KLHL8Q9P2G9 620 aaPredicted RBP11.7□□□□□ -0.54
TFF3-202ENST00000398431 POMT2Q9UKY4 750 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 ZNF451Q9Y4E5 1061 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 PIKFYVEQ9Y2I7 2098 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
TFF3-202ENST00000398431 SRP72O76094 671 aaKnown RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 PRAMEF1O95521 474 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 MSL3P1P0C860 447 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 ST6GAL1P15907 406 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 CDH3P22223 829 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 PRDX3P30048 256 aaKnown RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 AKT1P31749 480 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 ADRA1AP35348 466 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 MRPL49Q13405 166 aaKnown RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 ZNF385CQ66K41 422 aaPredicted RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 SLC6A19Q695T7 634 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 ARMC6Q6NXE6 501 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 P3H4Q92791 437 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 C19orf60Q96EN9 201 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 SMAD5Q99717 465 aaKnown RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 GOLPH3Q9H4A6 298 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 DEF6Q9H4E7 631 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 ASB8Q9H765 288 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 NHEJ1Q9H9Q4 299 aaPredicted RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
TFF3-202ENST00000398431 FAM8A1Q9UBU6 413 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 FKBPLQ9UIM3 349 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 SNX7Q9UNH6 387 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 ALG6Q9Y672 507 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
TFF3-202ENST00000398431 COLEC10Q9Y6Z7 277 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 FER1L5A0AVI2 2057 aa11.69□□□□□ -0.54
TFF3-202ENST00000398431 hCG_1818297A0A087WSY0 165 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 KLHL33A6NCF5 533 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 WIPF3A6NGB9 483 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 A6NL46 340 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 H3BMH7 237 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 DPM1O60762 260 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 KLF7O75840 302 aaPredicted RBP11.68□□□□□ -0.54
TFF3-202ENST00000398431 NDUFS1P28331 727 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 CDC25BP30305 580 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 PREPP48147 710 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 VAV2P52735 878 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 TAF1AQ15573 450 aaPredicted RBP11.68□□□□□ -0.54
TFF3-202ENST00000398431 PTCHD3Q3KNS1 767 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 PLEKHN1Q494U1 663 aaPredicted RBP11.68□□□□□ -0.54
TFF3-202ENST00000398431 MED25Q71SY5 747 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 SYTL1Q8IYJ3 562 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 TMEM102Q8N9M5 508 aaPredicted RBP11.68□□□□□ -0.54
TFF3-202ENST00000398431 PHC3Q8NDX5 983 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 ACVR1CQ8NER5 493 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 OR13C4Q8NGS5 318 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 HAUS1Q96CS2 278 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 CLIP3Q96DZ5 547 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms