RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 MSH3P20585 1137 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 MASP1P48740 699 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 HK3P52790 923 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 SLC35A2P78381 396 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 CYP4F3Q08477 520 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 KIAA0040Q15053 153 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 NPTX1Q15818 432 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 RHOXF1Q8NHV9 184 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 BRSK1Q8TDC3 778 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 TXNDC15Q96J42 360 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 DSN1Q9H410 356 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 EHD1Q9H4M9 534 aa17.07■□□□□ 0.32
EWSR1-206ENST00000397938 ELOVL7A1L3X0 281 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 CXCR6O00574 342 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 LSM1O15116 133 aaKnown RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 SCELO95171 688 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 PIRTP0C851 137 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 PTPN2P17706 415 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 RCVRNP35243 200 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 AFF1P51825 1210 aaKnown RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 GALNT3Q14435 633 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 CLCA4Q14CN2 919 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 LETMD1Q6P1Q0 360 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 SCD5Q86SK9 330 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 NKAPQ8N5F7 415 aaKnown RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 SLC13A3Q8WWT9 602 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 C1orf74Q96LT6 269 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 NSMCE3Q96MG7 304 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 DACH2Q96NX9 599 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 IKZF5Q9H5V7 419 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 RIMKLBQ9ULI2 386 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 TPRKBQ9Y3C4 175 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 LTBP3Q9NS15 1303 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 ADM5C9JUS6 153 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 FTH1P02794 183 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 RHOQP17081 205 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 PFKLP17858 780 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 FMO3P31513 532 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 ALDH7A1P49419 539 aaKnown RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 NR6A1Q15406 480 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 VARS2Q5ST30 1063 aaKnown RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 ATAD3BQ5T9A4 648 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 IL27RAQ6UWB1 636 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 HIPK1Q86Z02 1210 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 ZNF683Q8IZ20 524 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 SETD9Q8NE22 299 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 CDKN2AIPNLQ96HQ2 116 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 SEMA3CQ99985 751 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 THUMPD3Q9BV44 507 aaKnown RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 TPK1Q9H3S4 243 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 MAGIXQ9H6Y5 334 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.06■□□□□ 0.32
EWSR1-206ENST00000397938 INVSQ9Y283 1065 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 PTPRDP23468 1912 aa17.06■□□□□ 0.32
EWSR1-206ENST00000397938 FAM47E-STBD1D6RA91 191 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PSMB9P28065 219 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ST13P50502 369 aaKnown RBP17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PON2Q15165 354 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 SF3B4Q15427 424 aaKnown RBP eCLIP17.05■□□□□ 0.321e-8■■■■□ 20.4
EWSR1-206ENST00000397938 TIGD5Q53EQ6 642 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 CCDC81Q6ZN84 652 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PAGE2Q7Z2X7 111 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PSMA8Q8TAA3 256 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 HBEGFQ99075 208 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ACBD6Q9BR61 282 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 TMEM248Q9NWD8 314 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 OSGIN1Q9UJX0 560 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 IFT52Q9Y366 437 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PCNTO95613 3336 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ISPDA4D126 451 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 A8MU76 341 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 NUAK1O60285 661 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 UPK1BO75841 260 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 TSPAN12O95859 305 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 F2P00734 622 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 CAPN1P07384 714 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 NRIP1P48552 1158 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 SLC13A2Q13183 592 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 DGCR6Q14129 220 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 NDUFA5Q16718 116 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ALFQ53S48 1182 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 LAIR1Q6GTX8 287 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 AKAP14Q86UN6 197 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 LYSMD2Q8IV50 215 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 GTF2H4Q92759 462 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ITCHQ96J02 903 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 GAD1Q99259 594 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PKMYT1Q99640 499 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ZYG11BQ9C0D3 744 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 NMUR1Q9HB89 426 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 ANKHQ9HCJ1 492 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 DCAF13Q9NV06 445 aaKnown RBP17.05■□□□□ 0.32
EWSR1-206ENST00000397938 CD274Q9NZQ7 290 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 PCDHB14Q9Y5E9 798 aa17.05■□□□□ 0.32
EWSR1-206ENST00000397938 TRIP12Q14669 1992 aaPredicted RBP17.05■□□□□ 0.32
EWSR1-206ENST00000397938 MITFO75030 526 aaPredicted RBP17.04■□□□□ 0.32
EWSR1-206ENST00000397938 MT-ND2P03891 347 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms