RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 COL4A4P53420 1690 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 CDC7O00311 574 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 SLC22A3O75751 556 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 EIF2DP41214 584 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 ANKS6Q68DC2 871 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 PRR23CQ6ZRP0 262 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 SYVN1Q86TM6 617 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 LSM14AQ8ND56 463 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 RHEBL1Q8TAI7 183 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 CEP295NLQ96MC4 621 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 SERPINB11Q96P15 392 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 UGT2A1Q9Y4X1 527 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 SNX5Q9Y5X3 404 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 NPEPPSL1A6NEC2 478 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 RAD51BO15315 384 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 KERAO60938 352 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 EEDO75530 441 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ITGB1P05556 798 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 PCNAP12004 261 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 TUFMP49411 452 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 POLR2JP52435 117 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ARHGEF6Q15052 776 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 RBBP7Q16576 425 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ZNF181Q2M3W8 571 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 TMEM199Q8N511 208 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 OR2T11Q8NH01 316 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 OR4L1Q8NH43 312 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 STAG3L4Q8TBR4 150 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 OSCP1Q8WVF1 389 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ZBED2Q9BTP6 218 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ZYG11BQ9C0D3 744 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 MUC13Q9H3R2 512 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 LEF1Q9UJU2 399 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 RABL2BQ9UNT1 228 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 LOC285095A0A1B0GVY8 99 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 WASH4PA8MWX3 477 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 H0Y858 1186 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 TNFRSF10BO14763 440 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 SNX2O60749 519 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 NDUFS2O75306 463 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 VPS4BO75351 444 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 RPP40O75818 363 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 IL12AP29459 219 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 SUOXP51687 545 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 PLIN5Q00G26 463 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 SPATA19Q7Z5L4 167 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 POC5Q8NA72 575 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 PAPD5Q8NDF8 572 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 SLC22A17Q8WUG5 538 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 NUDT8Q8WV74 236 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 SGCDQ92629 289 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 CCDC177Q9NQR7 707 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 TLR9Q9NR96 1032 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ABCB10Q9NRK6 738 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ZNF225Q9UK10 706 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 ZNF221Q9UK13 617 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 GPSM3Q9Y4H4 160 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 TRPV2Q9Y5S1 764 aa15.73■□□□□ 0.11
CHMP1A-201ENST00000397901 SAGE2PA6NJ88 616 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 CCRL2O00421 344 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 MUSKO15146 869 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 TPPPO94811 219 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 SEC24AO95486 1093 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 UMPSP11172 480 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 RHOQP17081 205 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 ARL1P40616 181 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 EEFSECP57772 596 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 C19orf57Q0VDD7 668 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 PLA2G4EQ3MJ16 856 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 MS4A13Q5J8X5 152 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 CEP78Q5JTW2 689 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 GLYATQ6IB77 296 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 MSANTD2Q6P1R3 559 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 FKBP9P1Q75LS8 142 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 C8orf59Q8N0T1 100 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 SIMC1Q8NDZ2 872 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 IGSF8Q969P0 613 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 TRIM63Q969Q1 353 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 KIAA1191Q96A73 305 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 NSMCE2Q96MF7 247 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 BDH2Q9BUT1 245 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 PMF1-BGLAPU3KQ54 211 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 ZSCAN5BA6NJL1 495 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 M0QZ92 97 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 PTTG1O95997 202 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 HTR1AP08908 422 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 PRR35P0CG20 571 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 MYCLP1P12525 358 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 BMP1P13497 986 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 TCF3P15923 654 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 STC1P52823 247 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 GP2P55259 537 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 TBX4P57082 545 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 MTPNP58546 118 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 GNASQ5JWF2 1037 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 RAP1GAP2Q684P5 730 aa15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 GDF6Q6KF10 455 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-201ENST00000397901 CD300LGQ6UXG3 332 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms